印度尼西亚苏拉威西岛东南部Wawolesea温泉嗜热细菌中2型L-天冬氨酸酶基因的鉴定。

Q3 Agricultural and Biological Sciences
Muzuni, Ridha Aprilyani, Ardiansyah, Suriana, Muhammad Farij, Mathilda Theressa Gultom
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引用次数: 0

摘要

<;b>;背景和目的:</b>;2型L-天冬酰胺酶可作为癌症治疗剂,防止食品中丙烯酰胺的形成。热嗜盐细菌产生的酶可以在高温下提供高活性,因此在工业规模上需要它们。因此,本研究旨在确定嗜热嗜盐细菌分离株CAT3.4中编码2型L-天冬酰胺酶的基因的特征<;b>;材料和方法:</b>;本研究属于探索性研究。使用引物对AsnBc2-F2(5’-CTCAGGGAATCTCCATACTC-3’)和AsnBc-2-R2(5’CGATGTAACAGACAGCATC-3’。鉴定过程分阶段进行:使用改良的碱裂解法分离基因组DNA,在NCBI网站上使用BLASTn分析进行核苷酸和蛋白质相似性分析,使用MEGAX程序构建系统发育树,使用Bioedit程序进行限制性酶标测和氨基酸分析<;b>;结果:</b>;表征结果表明,PCR产物的大小为1594bp,CDS为1128bp,与<;i>;枯草芽孢杆菌</i>;,在物种水平上具有7种限制性酶作为2型L-天冬酰胺酶基因的分子标记:<;i>;Bsr</i>;GI,<;i>;Dra</i>;I、 <;i>;Eco</i>;RV,<;i>;Hind</i>;III、 <;i>;Hpy</i>;CH4IV,<;i>;Ssp</i>;I和<;i>;Tai</i>;I、 具有主要的亲水区域并且与<;i>;枯草芽孢杆菌</i>;菌株GOT9<;b>;结论:</b>;靶基因与编码来自<;i>;枯草芽孢杆菌</i>;最大同一性为98.85%,查询覆盖率为100%,E值为0。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Characterization of the Type 2 L-Asparaginase Gene in Thermohalophilic Bacterial from Wawolesea Hot Springs, Southeast Sulawesi, Indonesia.

<b>Background and Objective:</b> Type 2 L-asparaginase enzyme can be used as a cancer therapy agent and prevent acrylamide formation in food products. Enzymes produced by thermohalophilic bacteria can provide high activity at high temperatures so they are needed on an industrial scale. Hence, this study aims to determine the characteristics of the gene encoding type 2 L-asparaginase enzyme in the thermohalophilic bacterial isolate CAT3.4. <b>Materials and Methods:</b> This research is a type of exploratory research. The characteristics of the gene encoding type 2 L-asparaginase were determined using the PCR technique using the primer pairs AsnBac2-F2 (5'-CTCACGGGAATCTCCATAACTC-3') and AsnBac2-R2 (5'CAGCGATGTAACAGACAGCATC-3'). The characterization process was carried out in stages: Isolation of genomic DNA using a modified alkali-lysis method, nucleotide and protein similarity analysis using BLASTn analysis on the NCBI website, construction of a phylogenetic tree using the MEGAX program, restriction enzyme mapping and amino acid analysis using the Bioedit program. <b>Results:</b> The characterization results showed that the PCR product has a size of 1594 bp with a CDS of 1128 bp, has a similarity value of 100% with <i>Bacillus subtilis</i>, has seven restriction enzymes as molecular markers for the type 2 L-asparaginase gene at the species level: <i>Bsr</i>GI, <i>Dra</i>I, <i>Eco</i>RV, <i>Hind</i>III, <i>Hpy</i>CH4IV , <i>Ssp</i>I and <i>Tai</i>I, have dominant hydrophilic regions and are in the same subclass as <i>Bacillus subtilis</i> strain GOT9. <b>Conclusion:</b> The target gene was similar to the gene encoding type 2 L-asparaginase from <i>Bacillus subtilis</i> with a max identity of 98.85%, query coverage value of 100% and E-value of 0.

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来源期刊
Pakistan Journal of Biological Sciences
Pakistan Journal of Biological Sciences Agricultural and Biological Sciences-Agronomy and Crop Science
CiteScore
1.90
自引率
0.00%
发文量
102
期刊介绍: Pakistan Journal of Biological Sciences (PJBS) is an international, peer-reviewed and well indexed scientific journal seeks to promote and disseminate the knowledge of biological sciences by publishing outstanding research in the field. Scope of the journal includes: Cell biology, developmental biology, structural biology, microbiology, entomology, toxicology, molecular biology & genetics, biochemistry, biotechnology, biodiversity, ecology, marine biology, plant biology and bioinformatics.
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