{"title":"绒毡层特异性基因上游调控模块(URMs)识别调控顺式元件和转录因子的计算机分析","authors":"P. Sharma, P. Burma","doi":"10.4236/AJMB.2018.81002","DOIUrl":null,"url":null,"abstract":"The present work presents an iin silicoi analysis of Upstream Regulatory Modules (URMs) of genes expressed in tapetum specific manner in dicotyledon and monocotyledon plants. In the current analysis, we identified several motifs conserved in these URMs of which ten were observed to be part of known icisi-elements using tools and databases like MEME, PLACE, MAST and TFSEARCH. We also identified that binding sites for two transcription factors, DOF and WRKY71 were found to be present in majority of the URMs.","PeriodicalId":65391,"journal":{"name":"美国分子生物学期刊(英文)","volume":"08 1","pages":"13-25"},"PeriodicalIF":0.0000,"publicationDate":"2018-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"An in silico Analysis of Upstream Regulatory Modules (URMs) of Tapetum Specific Genes to Identify Regulatory cis -Elements and Transcription Factors\",\"authors\":\"P. Sharma, P. Burma\",\"doi\":\"10.4236/AJMB.2018.81002\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The present work presents an iin silicoi analysis of Upstream Regulatory Modules (URMs) of genes expressed in tapetum specific manner in dicotyledon and monocotyledon plants. In the current analysis, we identified several motifs conserved in these URMs of which ten were observed to be part of known icisi-elements using tools and databases like MEME, PLACE, MAST and TFSEARCH. We also identified that binding sites for two transcription factors, DOF and WRKY71 were found to be present in majority of the URMs.\",\"PeriodicalId\":65391,\"journal\":{\"name\":\"美国分子生物学期刊(英文)\",\"volume\":\"08 1\",\"pages\":\"13-25\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2018-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"美国分子生物学期刊(英文)\",\"FirstCategoryId\":\"1089\",\"ListUrlMain\":\"https://doi.org/10.4236/AJMB.2018.81002\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"美国分子生物学期刊(英文)","FirstCategoryId":"1089","ListUrlMain":"https://doi.org/10.4236/AJMB.2018.81002","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
An in silico Analysis of Upstream Regulatory Modules (URMs) of Tapetum Specific Genes to Identify Regulatory cis -Elements and Transcription Factors
The present work presents an iin silicoi analysis of Upstream Regulatory Modules (URMs) of genes expressed in tapetum specific manner in dicotyledon and monocotyledon plants. In the current analysis, we identified several motifs conserved in these URMs of which ten were observed to be part of known icisi-elements using tools and databases like MEME, PLACE, MAST and TFSEARCH. We also identified that binding sites for two transcription factors, DOF and WRKY71 were found to be present in majority of the URMs.
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