对Park等人的“吸烟与衰老的因果关系:端粒磨损和肌肉减少症的孟德尔随机化分析”的评论。

IF 8.9 1区 医学
Mingchong Liu, Chensong Yang, Yutao Pan, Guixin Sun
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These findings suggested that ever being a regular smoker in life (smoking initiation) was causally associated with shorter leucocyte telomere length (LTL), lower appendicular lean mass index (ALM), slower walking pace, and lower time spent on moderate-to-vigorous physical activity (MVPA).<span><sup>2</sup></span></p><p>However, in this study, the high sample overlapping rate in the two-sample mendelian randomization raised concern about the conclusion: the data sources in the study were from UK Biobank (<i>N</i> = 337 138, for aging and sarcopenia) and a GWAS meta-analysis study named GSCAN (<i>N</i> = 1.2 million, for tobacco smoking).<span><sup>3</sup></span> We carefully read the raw study of the GSCAN, and unfortunately, in the 1.2 million samples, 383 613 were from UK Biobank. According to the calculation methods for the maximum estimated value for sample overlapping rate, the cohort of aging and sarcopenia (337 138 samples) may be fully overlapped with samples for smoking (383 613 samples), which means the maximum estimated sample overlapping rate might be 100%. It was the violation of the essential assumptions of two-sample MR. The bias caused by sample overlapping should not be ignored.<span><sup>4</sup></span></p><p>Interestingly, the raw data provided by GSCAN contains a dataset without UK Biobank cohorts (https://conservancy.umn.edu/handle/11299/201564). Therefore, using the GSCAN data without UK Biobank, we tried to re-perform the MR study by Park et al. Briefly, the data including 848 460 individuals for exposure (tobacco smoking) were from the GSCAN data without UK Biobank individuals. For outcomes, similar to Park's study, we used the summary GWAS data of the UK Biobank from the IEU database.<span><sup>5</sup></span> Except for handgrip strength, the phenotypes of other outcomes were as same as the previous study: including LTL (<i>N</i> = 472 174, datasets ID: ieu-b-4879), adjusted appendicular lean mass (<i>N</i> = 450 243, datasets ID: GCST90000025), walking pace (<i>N</i> = 459 915, datasets ID: ukb-b-4711), moderate to vigorous physical activity (<i>N</i> = 377 234, datasets ID: GCST006097). In the study by Park et al., handgrip strength was defined as the average value of two hands. Because we did not have access to the detailed UK Biobank data, our study's phenotypes of handgrip strength were divided into the right hand (<i>N</i> = 461 089, datasets ID: ukb-b-10215) and left hand (<i>N</i> = 461 026, datasets ID: ukb-b-7478). In the GWAS of GSCAN data without UK Biobank, only eight SNPs associated with Smoking Initiation were identified at the significance level of <i>P</i> values &lt;5E-8. Therefore, another analysis at the significance level of <i>P</i> values &lt;5E-6 was also conducted. To satisfy the three core consumptions of MR, five strict SNPs filtration steps were set: step 1, clumping the SNPs (linkage disequilibrium (LD) <i>r</i><sup>2</sup> &gt; 0.01, kb = 500) 30643251; step 2, excluding the SNPs associated with confounders; step 3, excluding the SNPs in the harmonization procedures; step 4, excluding the SNPs associated with outcomes; step 5, excluding the SNPs with potential pleiotropy by MR-PRESSO. The main MR analyses were performed using random-effects inverse-variance weighted (IVW) analysis, MR-Egger regression, and weighted median test.</p><p>In our analysis, only the causal associations of smoking with LTL and walking pace were proved (Figure 1). Being a regular smoker may causally associate with lower LTL (IVW, <i>P</i> = 0.045; Weighted median, <i>P</i> = 0.008) and slower walking pace (IVW, <i>P</i> = 0.043; Weighted median, <i>P</i> = 0.017). However, the other associations found in the study by Park et al., including smoking with ALM and MVPA, were not proved. As for handgrip strength, both studies provided no significant causal estimates between smoking and handgrip strength. Moreover, no significant pleiotropic effect was founded in the main MR analysis (all MR-Egger intercept <i>P</i> &lt; 0.05), which supported the main estimates in our study.</p><p>In conclusion, based on our study and previous study, we believe the causal relationships between smoking and LTL and walking pace could be proven. The causal role of smoking in ALM and MVPA may need further discussion. 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For outcomes, similar to Park's study, we used the summary GWAS data of the UK Biobank from the IEU database.<span><sup>5</sup></span> Except for handgrip strength, the phenotypes of other outcomes were as same as the previous study: including LTL (<i>N</i> = 472 174, datasets ID: ieu-b-4879), adjusted appendicular lean mass (<i>N</i> = 450 243, datasets ID: GCST90000025), walking pace (<i>N</i> = 459 915, datasets ID: ukb-b-4711), moderate to vigorous physical activity (<i>N</i> = 377 234, datasets ID: GCST006097). In the study by Park et al., handgrip strength was defined as the average value of two hands. Because we did not have access to the detailed UK Biobank data, our study's phenotypes of handgrip strength were divided into the right hand (<i>N</i> = 461 089, datasets ID: ukb-b-10215) and left hand (<i>N</i> = 461 026, datasets ID: ukb-b-7478). 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引用次数: 1

摘要

众所周知,吸烟已被证明与许多疾病有关,其中就包括肌肉减少症然而,吸烟作为一种生活方式,在相当长的时间内都会对我们的身体产生影响,这对研究人员来说是一个很大的挑战,通过随机对照试验来确定吸烟在疾病中的因果作用。因此,我们阅读了Park等人最近发表的论文。这是一项设计良好的孟德尔随机化(MR)研究,使用全基因组关联研究(GWASs),可能证明吸烟与端粒磨损和肌肉减少症之间存在因果关系的证据。这些发现表明,在生活中经常吸烟(开始吸烟)与较短的白细胞端粒长度(LTL)、较低的阑尾瘦质量指数(ALM)、较慢的步行速度和较低的中高强度体育活动(MVPA)时间有关。2然而,在本研究中,双样本孟德尔随机化中的高样本重叠率引起了对结论的关注:研究中的数据来源来自UK Biobank (N = 337138,用于衰老和肌肉减少症)和GWAS荟萃分析研究GSCAN (N = 120万,用于吸烟)我们仔细阅读了GSCAN的原始研究,不幸的是,在120万个样本中,有383 613个来自UK Biobank。根据样本重叠率最大估计值的计算方法,衰老和肌肉减少症队列(337 138个样本)可能与吸烟队列(383 613个样本)完全重叠,即样本重叠率的最大估计值可能为100%。这违反了双样本mr的基本假设,样本重叠引起的偏差不容忽视。有趣的是,GSCAN提供的原始数据包含一个没有UK Biobank队列的数据集(https://conservancy.umn.edu/handle/11299/201564)。因此,使用没有UK Biobank的GSCAN数据,我们试图重新执行Park等人的MR研究。简而言之,包括848460名暴露(吸烟)个体的数据来自GSCAN数据,不包括UK Biobank个体。对于结果,与Park的研究类似,我们使用了IEU数据库中UK Biobank的GWAS汇总数据除握力外,其他结果的表型与既往研究相同:包括LTL (N = 472 174,数据集ID: ieu-b-4879)、调整后的阑尾瘦质量(N = 450 243,数据集ID: GCST90000025)、步行速度(N = 459 915,数据集ID: ukb-b-4711)、中度至剧烈运动(N = 377 234,数据集ID: GCST006097)。在Park等人的研究中,将握力定义为两只手的平均值。由于我们无法获得详细的UK Biobank数据,我们的研究将握力的表型分为右手(N = 461089,数据集ID: ukb-b-10215)和左手(N = 461026,数据集ID: ukb-b-7478)。在没有UK Biobank的GSCAN数据的GWAS中,只有8个与吸烟开始相关的snp在P值的显著性水平上被发现&lt;5E-8。因此,在P值&lt;5E-6的显著性水平上进行另一次分析。为了满足MR的三个核心消耗,设置了5个严格的SNPs过滤步骤:步骤1,聚集SNPs(连锁不平衡(LD) r2 &gt;0.01, kb = 500) 30643251;步骤2,排除与混杂因素相关的snp;步骤3,排除统一程序中的snp;步骤4,排除与结果相关的snp;第5步,通过MR-PRESSO排除具有潜在多效性的snp。主要MR分析采用随机效应反方差加权(IVW)分析、MR- egger回归和加权中位数检验。在我们的分析中,只证明了吸烟与LTL和步行速度之间的因果关系(图1)。经常吸烟可能与较低的LTL存在因果关系(IVW, P = 0.045;加权中位数,P = 0.008)和较慢的步行速度(IVW, P = 0.043;加权中位数,P = 0.017)。然而,Park等人在研究中发现的其他关联,包括吸烟与ALM和MVPA,没有得到证实。至于握力,两项研究都没有提供吸烟和握力之间的显著因果估计。此外,在主MR分析中没有发现显著的多效性效应(所有MR- egger截距P &lt;0.05),这支持了我们研究中的主要估计。总之,基于我们的研究和之前的研究,我们认为吸烟与LTL和步行速度之间的因果关系是可以被证明的。吸烟在ALM和MVPA中的因果作用可能需要进一步讨论。此外,我们倾向于认为吸烟和握力之间不存在因果关系。 此外,根据欧洲老年人肌少症工作组(EWGSOP2)修订后的肌少症定义,低肌力是肌少症最可靠的衡量标准,肌少症可以通过肌肉数量或质量低来确诊,而低体能表现则被认为是衡量肌少症严重程度的标准结合我们和以往的研究,在肌肉减少症的特征中,只证明了肌肉减少症与步行速度之间的因果关系,而没有提供肌肉力量和数量的显著而坚实的证据。吸烟对肌肉减少症的因果关系有待进一步研究。作者宣称他们没有竞争利益。国家自然科学基金(批准/奖励号:81971169)浦东新区卫健委领军人才培养计划(批准号:PWR 12020-06)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Comment on ‘Causal linkage of tobacco smoking with ageing: Mendelian randomization analysis towards telomere attrition and sarcopenia’ by Park et al.

As we all know, it has been proven that tobacco smoking is associated with many diseases, including sarcopenia.1 However, tobacco smoking as a lifestyle always affects our bodies for a quite long time, which is a great challenge for researchers to conduct a randomized controlled trial to identify the causal roles of tobacco smoking in diseases. We therefore read the recent paper by Park et al. This is a well-designed Mendelian randomization (MR) study, using genome-wide association studies (GWASs), which may prove the evidence of causal associations of tobacco smoking with telomere attrition and sarcopenia. These findings suggested that ever being a regular smoker in life (smoking initiation) was causally associated with shorter leucocyte telomere length (LTL), lower appendicular lean mass index (ALM), slower walking pace, and lower time spent on moderate-to-vigorous physical activity (MVPA).2

However, in this study, the high sample overlapping rate in the two-sample mendelian randomization raised concern about the conclusion: the data sources in the study were from UK Biobank (N = 337 138, for aging and sarcopenia) and a GWAS meta-analysis study named GSCAN (N = 1.2 million, for tobacco smoking).3 We carefully read the raw study of the GSCAN, and unfortunately, in the 1.2 million samples, 383 613 were from UK Biobank. According to the calculation methods for the maximum estimated value for sample overlapping rate, the cohort of aging and sarcopenia (337 138 samples) may be fully overlapped with samples for smoking (383 613 samples), which means the maximum estimated sample overlapping rate might be 100%. It was the violation of the essential assumptions of two-sample MR. The bias caused by sample overlapping should not be ignored.4

Interestingly, the raw data provided by GSCAN contains a dataset without UK Biobank cohorts (https://conservancy.umn.edu/handle/11299/201564). Therefore, using the GSCAN data without UK Biobank, we tried to re-perform the MR study by Park et al. Briefly, the data including 848 460 individuals for exposure (tobacco smoking) were from the GSCAN data without UK Biobank individuals. For outcomes, similar to Park's study, we used the summary GWAS data of the UK Biobank from the IEU database.5 Except for handgrip strength, the phenotypes of other outcomes were as same as the previous study: including LTL (N = 472 174, datasets ID: ieu-b-4879), adjusted appendicular lean mass (N = 450 243, datasets ID: GCST90000025), walking pace (N = 459 915, datasets ID: ukb-b-4711), moderate to vigorous physical activity (N = 377 234, datasets ID: GCST006097). In the study by Park et al., handgrip strength was defined as the average value of two hands. Because we did not have access to the detailed UK Biobank data, our study's phenotypes of handgrip strength were divided into the right hand (N = 461 089, datasets ID: ukb-b-10215) and left hand (N = 461 026, datasets ID: ukb-b-7478). In the GWAS of GSCAN data without UK Biobank, only eight SNPs associated with Smoking Initiation were identified at the significance level of P values <5E-8. Therefore, another analysis at the significance level of P values <5E-6 was also conducted. To satisfy the three core consumptions of MR, five strict SNPs filtration steps were set: step 1, clumping the SNPs (linkage disequilibrium (LD) r2 > 0.01, kb = 500) 30643251; step 2, excluding the SNPs associated with confounders; step 3, excluding the SNPs in the harmonization procedures; step 4, excluding the SNPs associated with outcomes; step 5, excluding the SNPs with potential pleiotropy by MR-PRESSO. The main MR analyses were performed using random-effects inverse-variance weighted (IVW) analysis, MR-Egger regression, and weighted median test.

In our analysis, only the causal associations of smoking with LTL and walking pace were proved (Figure 1). Being a regular smoker may causally associate with lower LTL (IVW, P = 0.045; Weighted median, P = 0.008) and slower walking pace (IVW, P = 0.043; Weighted median, P = 0.017). However, the other associations found in the study by Park et al., including smoking with ALM and MVPA, were not proved. As for handgrip strength, both studies provided no significant causal estimates between smoking and handgrip strength. Moreover, no significant pleiotropic effect was founded in the main MR analysis (all MR-Egger intercept P < 0.05), which supported the main estimates in our study.

In conclusion, based on our study and previous study, we believe the causal relationships between smoking and LTL and walking pace could be proven. The causal role of smoking in ALM and MVPA may need further discussion. Moreover, we tend to believe that no causal relationship between smoking and handgrip strength exists.

In addition, according to the revised sarcopenia definition from the European Working Group on Sarcopenia in Older People (EWGSOP2), low muscle strength is the most reliable measure of sarcopenia, and sarcopenia could be confirmed by low muscle quantity or quality, while low physical performance is considered to measure the severity of sarcopenia.6 Considering both our and previous studies, in the sarcopenia traits, only the causal relationship between sarcopenia and the walking pace was proved, while no significant and solid evidence for muscle strength and quantity was provided. The causal effect of tobacco smoking on sarcopenia needs further studies.

The authors declare that they have no competing interests.

National Natural Science Foundation of China (Grant/Award Number:81971169) Leading Talents Training Program of Pudong New Area Health Commission (Grant ID: PWR 12020-06).

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来源期刊
Journal of Cachexia, Sarcopenia and Muscle
Journal of Cachexia, Sarcopenia and Muscle Medicine-Orthopedics and Sports Medicine
自引率
12.40%
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期刊介绍: The Journal of Cachexia, Sarcopenia, and Muscle is a prestigious, peer-reviewed international publication committed to disseminating research and clinical insights pertaining to cachexia, sarcopenia, body composition, and the physiological and pathophysiological alterations occurring throughout the lifespan and in various illnesses across the spectrum of life sciences. This journal serves as a valuable resource for physicians, biochemists, biologists, dieticians, pharmacologists, and students alike.
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