Chengjie Ren, Jieying Wang, Felipe Bastida, Manuel Delgado-Baquerizo, Yuanhe Yang, Jun Wang, Zekun Zhong, Zhenghu Zhou, Shuohong Zhang, Yaoxin Guo, Sha Zhou, Gehong Wei, Xinhui Han, Gaihe Yang, Fazhu Zhao
{"title":"微生物特性决定了土壤碳排放对森林各生物群系新鲜碳输入的响应","authors":"Chengjie Ren, Jieying Wang, Felipe Bastida, Manuel Delgado-Baquerizo, Yuanhe Yang, Jun Wang, Zekun Zhong, Zhenghu Zhou, Shuohong Zhang, Yaoxin Guo, Sha Zhou, Gehong Wei, Xinhui Han, Gaihe Yang, Fazhu Zhao","doi":"10.1111/gcb.16004","DOIUrl":null,"url":null,"abstract":"<p>Soil priming is a microbial-driven process, which determines key soil–climate feedbacks in response to fresh carbon inputs. Despite its importance, the microbial traits behind this process are largely undetermined. Knowledge of the role of these traits is integral to advance our understanding of how soil microbes regulate carbon (C) emissions in forests, which support the largest soil carbon stocks globally. Using metagenomic sequencing and <sup>13</sup>C-glucose, we provide unprecedented evidence that microbial traits explain a unique portion of the variation in soil priming across forest biomes from tropical to cold temperature regions. We show that microbial functional profiles associated with the degradation of labile C, especially rapid simple sugar metabolism, drive soil priming in different forests. Genes involved in the degradation of lignin and aromatic compounds were negatively associated with priming effects in temperate forests, whereas the highest level of soil priming was associated with β-glucosidase genes in tropical/subtropical forests. Moreover, we reconstructed, for the first time, 42 whole bacterial genomes associated with the soil priming effect and found that these organisms support important gene machinery involved in priming effect. Collectively, our work demonstrates the importance of microbial traits to explain soil priming across forest biomes and suggests that rapid carbon metabolism is responsible for priming effects in forests. This knowledge is important because it advances our understanding on the microbial mechanisms mediating soil–climate feedbacks at a continental scale.</p>","PeriodicalId":175,"journal":{"name":"Global Change Biology","volume":"28 4","pages":"1516-1528"},"PeriodicalIF":10.8000,"publicationDate":"2021-11-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"25","resultStr":"{\"title\":\"Microbial traits determine soil C emission in response to fresh carbon inputs in forests across biomes\",\"authors\":\"Chengjie Ren, Jieying Wang, Felipe Bastida, Manuel Delgado-Baquerizo, Yuanhe Yang, Jun Wang, Zekun Zhong, Zhenghu Zhou, Shuohong Zhang, Yaoxin Guo, Sha Zhou, Gehong Wei, Xinhui Han, Gaihe Yang, Fazhu Zhao\",\"doi\":\"10.1111/gcb.16004\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Soil priming is a microbial-driven process, which determines key soil–climate feedbacks in response to fresh carbon inputs. Despite its importance, the microbial traits behind this process are largely undetermined. Knowledge of the role of these traits is integral to advance our understanding of how soil microbes regulate carbon (C) emissions in forests, which support the largest soil carbon stocks globally. Using metagenomic sequencing and <sup>13</sup>C-glucose, we provide unprecedented evidence that microbial traits explain a unique portion of the variation in soil priming across forest biomes from tropical to cold temperature regions. We show that microbial functional profiles associated with the degradation of labile C, especially rapid simple sugar metabolism, drive soil priming in different forests. Genes involved in the degradation of lignin and aromatic compounds were negatively associated with priming effects in temperate forests, whereas the highest level of soil priming was associated with β-glucosidase genes in tropical/subtropical forests. Moreover, we reconstructed, for the first time, 42 whole bacterial genomes associated with the soil priming effect and found that these organisms support important gene machinery involved in priming effect. Collectively, our work demonstrates the importance of microbial traits to explain soil priming across forest biomes and suggests that rapid carbon metabolism is responsible for priming effects in forests. This knowledge is important because it advances our understanding on the microbial mechanisms mediating soil–climate feedbacks at a continental scale.</p>\",\"PeriodicalId\":175,\"journal\":{\"name\":\"Global Change Biology\",\"volume\":\"28 4\",\"pages\":\"1516-1528\"},\"PeriodicalIF\":10.8000,\"publicationDate\":\"2021-11-22\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"25\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Global Change Biology\",\"FirstCategoryId\":\"93\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1111/gcb.16004\",\"RegionNum\":1,\"RegionCategory\":\"环境科学与生态学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"BIODIVERSITY CONSERVATION\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Global Change Biology","FirstCategoryId":"93","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/gcb.16004","RegionNum":1,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIODIVERSITY CONSERVATION","Score":null,"Total":0}
Microbial traits determine soil C emission in response to fresh carbon inputs in forests across biomes
Soil priming is a microbial-driven process, which determines key soil–climate feedbacks in response to fresh carbon inputs. Despite its importance, the microbial traits behind this process are largely undetermined. Knowledge of the role of these traits is integral to advance our understanding of how soil microbes regulate carbon (C) emissions in forests, which support the largest soil carbon stocks globally. Using metagenomic sequencing and 13C-glucose, we provide unprecedented evidence that microbial traits explain a unique portion of the variation in soil priming across forest biomes from tropical to cold temperature regions. We show that microbial functional profiles associated with the degradation of labile C, especially rapid simple sugar metabolism, drive soil priming in different forests. Genes involved in the degradation of lignin and aromatic compounds were negatively associated with priming effects in temperate forests, whereas the highest level of soil priming was associated with β-glucosidase genes in tropical/subtropical forests. Moreover, we reconstructed, for the first time, 42 whole bacterial genomes associated with the soil priming effect and found that these organisms support important gene machinery involved in priming effect. Collectively, our work demonstrates the importance of microbial traits to explain soil priming across forest biomes and suggests that rapid carbon metabolism is responsible for priming effects in forests. This knowledge is important because it advances our understanding on the microbial mechanisms mediating soil–climate feedbacks at a continental scale.
期刊介绍:
Global Change Biology is an environmental change journal committed to shaping the future and addressing the world's most pressing challenges, including sustainability, climate change, environmental protection, food and water safety, and global health.
Dedicated to fostering a profound understanding of the impacts of global change on biological systems and offering innovative solutions, the journal publishes a diverse range of content, including primary research articles, technical advances, research reviews, reports, opinions, perspectives, commentaries, and letters. Starting with the 2024 volume, Global Change Biology will transition to an online-only format, enhancing accessibility and contributing to the evolution of scholarly communication.