Zhiqin Zhu , Xianyu He , Guanqiu Qi , Yuanyuan Li , Baisen Cong , Yu Liu
{"title":"基于深度语义和边缘信息融合的多模式MRI脑肿瘤分割","authors":"Zhiqin Zhu , Xianyu He , Guanqiu Qi , Yuanyuan Li , Baisen Cong , Yu Liu","doi":"10.1016/j.inffus.2022.10.022","DOIUrl":null,"url":null,"abstract":"<div><p>Brain tumor segmentation in multimodal MRI has great significance in clinical diagnosis and treatment. The utilization of multimodal information plays a crucial role in brain tumor segmentation. However, most existing methods focus on the extraction and selection of deep semantic features, while ignoring some features with specific meaning and importance to the segmentation problem. In this paper, we propose a brain tumor segmentation method based on the fusion of deep semantics and edge information in multimodal MRI, aiming to achieve a more sufficient utilization of multimodal information for accurate segmentation. The proposed method mainly consists of a semantic segmentation module, an edge detection module and a feature fusion module. In the semantic segmentation module, the Swin Transformer is adopted to extract semantic features and a shifted patch tokenization strategy is introduced for better training. The edge detection module is designed based on convolutional neural networks (CNNs) and an edge spatial attention block (ESAB) is presented for feature enhancement. The feature fusion module aims to fuse the extracted semantic and edge features, and we design a multi-feature inference block (MFIB) based on graph convolution to perform feature reasoning and information dissemination for effective feature fusion. The proposed method is validated on the popular BraTS benchmarks. The experimental results verify that the proposed method outperforms a number of state-of-the-art brain tumor segmentation methods. <strong>The source code of the proposed method is available at</strong> <span>https://github.com/HXY-99/brats</span><svg><path></path></svg>.</p></div>","PeriodicalId":50367,"journal":{"name":"Information Fusion","volume":"91 ","pages":"Pages 376-387"},"PeriodicalIF":14.7000,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"97","resultStr":"{\"title\":\"Brain tumor segmentation based on the fusion of deep semantics and edge information in multimodal MRI\",\"authors\":\"Zhiqin Zhu , Xianyu He , Guanqiu Qi , Yuanyuan Li , Baisen Cong , Yu Liu\",\"doi\":\"10.1016/j.inffus.2022.10.022\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Brain tumor segmentation in multimodal MRI has great significance in clinical diagnosis and treatment. The utilization of multimodal information plays a crucial role in brain tumor segmentation. However, most existing methods focus on the extraction and selection of deep semantic features, while ignoring some features with specific meaning and importance to the segmentation problem. In this paper, we propose a brain tumor segmentation method based on the fusion of deep semantics and edge information in multimodal MRI, aiming to achieve a more sufficient utilization of multimodal information for accurate segmentation. The proposed method mainly consists of a semantic segmentation module, an edge detection module and a feature fusion module. In the semantic segmentation module, the Swin Transformer is adopted to extract semantic features and a shifted patch tokenization strategy is introduced for better training. The edge detection module is designed based on convolutional neural networks (CNNs) and an edge spatial attention block (ESAB) is presented for feature enhancement. The feature fusion module aims to fuse the extracted semantic and edge features, and we design a multi-feature inference block (MFIB) based on graph convolution to perform feature reasoning and information dissemination for effective feature fusion. The proposed method is validated on the popular BraTS benchmarks. The experimental results verify that the proposed method outperforms a number of state-of-the-art brain tumor segmentation methods. <strong>The source code of the proposed method is available at</strong> <span>https://github.com/HXY-99/brats</span><svg><path></path></svg>.</p></div>\",\"PeriodicalId\":50367,\"journal\":{\"name\":\"Information Fusion\",\"volume\":\"91 \",\"pages\":\"Pages 376-387\"},\"PeriodicalIF\":14.7000,\"publicationDate\":\"2023-03-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"97\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Information Fusion\",\"FirstCategoryId\":\"94\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1566253522001981\",\"RegionNum\":1,\"RegionCategory\":\"计算机科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Information Fusion","FirstCategoryId":"94","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1566253522001981","RegionNum":1,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE","Score":null,"Total":0}
Brain tumor segmentation based on the fusion of deep semantics and edge information in multimodal MRI
Brain tumor segmentation in multimodal MRI has great significance in clinical diagnosis and treatment. The utilization of multimodal information plays a crucial role in brain tumor segmentation. However, most existing methods focus on the extraction and selection of deep semantic features, while ignoring some features with specific meaning and importance to the segmentation problem. In this paper, we propose a brain tumor segmentation method based on the fusion of deep semantics and edge information in multimodal MRI, aiming to achieve a more sufficient utilization of multimodal information for accurate segmentation. The proposed method mainly consists of a semantic segmentation module, an edge detection module and a feature fusion module. In the semantic segmentation module, the Swin Transformer is adopted to extract semantic features and a shifted patch tokenization strategy is introduced for better training. The edge detection module is designed based on convolutional neural networks (CNNs) and an edge spatial attention block (ESAB) is presented for feature enhancement. The feature fusion module aims to fuse the extracted semantic and edge features, and we design a multi-feature inference block (MFIB) based on graph convolution to perform feature reasoning and information dissemination for effective feature fusion. The proposed method is validated on the popular BraTS benchmarks. The experimental results verify that the proposed method outperforms a number of state-of-the-art brain tumor segmentation methods. The source code of the proposed method is available athttps://github.com/HXY-99/brats.
期刊介绍:
Information Fusion serves as a central platform for showcasing advancements in multi-sensor, multi-source, multi-process information fusion, fostering collaboration among diverse disciplines driving its progress. It is the leading outlet for sharing research and development in this field, focusing on architectures, algorithms, and applications. Papers dealing with fundamental theoretical analyses as well as those demonstrating their application to real-world problems will be welcome.