Pardis Roozbahani, Rahime Eshaghi Malekshah, Mehdi Salehi, Sakineh Parvarinezhad, Maciej Kubicki
{"title":"新型双核Ni(II)Schiff碱配合物诱导的非共价交换:晶体结构研究、电化学评估、Hirschfeld表面分析和严重急性呼吸系统综合征冠状病毒2型对接研究","authors":"Pardis Roozbahani, Rahime Eshaghi Malekshah, Mehdi Salehi, Sakineh Parvarinezhad, Maciej Kubicki","doi":"10.1002/aoc.7254","DOIUrl":null,"url":null,"abstract":"<p>In this work, novel Ni (II) complexes, namely, [Ni<sub>2</sub>(L)<sub>2</sub>(OAc)<sub>2</sub>(EtOH)<sub>2</sub>] <b>(1a)</b>, [Ni<sub>2</sub>(L)<sub>2</sub>(OAc)<sub>2</sub>(H<sub>2</sub>O)<sub>2</sub>] <b>(1b-1)</b> and [Ni<sub>2</sub>(L)<sub>2</sub>(OAc)<sub>2</sub>(EtOH)<sub>2</sub>] <b>(1b-2)</b> as co-crystal were synthesized by the 1:1 condensation (https://www.sciencedirect.com/topics/chemistry/condensation) of Ni (CH<sub>3</sub>COO)<sub>2</sub>·4H<sub>2</sub>O and Schiff base ligand (H<sub>2</sub>L) (2-hydroxy-4-methoxybenzaldehyde and 2-amino-2-methylpropanol). The ligand based on Schiff base and fabricated complexes <b>(1a)</b> and <b>(1b-1 and 1b-2)</b> were successfully identified by CHN assessment, FT-IR, UV–Vis spectra, melting point and CV voltammogram. The electrochemical behavior investigation shows that the nickel complexes exhibited irreversible oxidation processes in methanol solution. Additionally, the crystal structures of complexes <b>(1a)</b> and <b>(1b)</b> have been recognized by single-crystal X-ray diffraction investigation. It turned out that the complexes <b>(1b-1)</b> and <b>(1b-2)</b> crystallize together, making a co-crystal <b>1b</b> with an additional EtOH solvent molecule in the crystal structure. A detailed study of intermolecular exchanges was performed using attractive graphical analysis tools such as three-dimensional Hirshfeld surfaces analysis, two-dimensional fingerprint plots (FPs), and enrichment ratios (E), which make C-H … C, C-H … O hydrogen bond, C … O, H … H, and O … O short contacts on Hirshfeld surfaces with color code are observed. Moreover, an appraisement of the inhibitory trace against coronavirus (main protease SARS-CoV-2, PDB ID: 6Y2F) and molecular targets of human angiotensin-converting enzyme-2 (ACE-2) was performed by a molecular docking study in which two nickel complexes performed best for PDB protein ID: 6M0J and all three complexes for PDB protein ID: 6Y2F.</p>","PeriodicalId":8344,"journal":{"name":"Applied Organometallic Chemistry","volume":"37 11","pages":""},"PeriodicalIF":3.7000,"publicationDate":"2023-09-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Novel dinuclear Ni (II) Schiff base complexes induced noncovalent exchanges: Crystal structure investigation, electrochemical assessment, Hirshfeld surface analysis and SARS-CoV-2 docking study\",\"authors\":\"Pardis Roozbahani, Rahime Eshaghi Malekshah, Mehdi Salehi, Sakineh Parvarinezhad, Maciej Kubicki\",\"doi\":\"10.1002/aoc.7254\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>In this work, novel Ni (II) complexes, namely, [Ni<sub>2</sub>(L)<sub>2</sub>(OAc)<sub>2</sub>(EtOH)<sub>2</sub>] <b>(1a)</b>, [Ni<sub>2</sub>(L)<sub>2</sub>(OAc)<sub>2</sub>(H<sub>2</sub>O)<sub>2</sub>] <b>(1b-1)</b> and [Ni<sub>2</sub>(L)<sub>2</sub>(OAc)<sub>2</sub>(EtOH)<sub>2</sub>] <b>(1b-2)</b> as co-crystal were synthesized by the 1:1 condensation (https://www.sciencedirect.com/topics/chemistry/condensation) of Ni (CH<sub>3</sub>COO)<sub>2</sub>·4H<sub>2</sub>O and Schiff base ligand (H<sub>2</sub>L) (2-hydroxy-4-methoxybenzaldehyde and 2-amino-2-methylpropanol). The ligand based on Schiff base and fabricated complexes <b>(1a)</b> and <b>(1b-1 and 1b-2)</b> were successfully identified by CHN assessment, FT-IR, UV–Vis spectra, melting point and CV voltammogram. The electrochemical behavior investigation shows that the nickel complexes exhibited irreversible oxidation processes in methanol solution. Additionally, the crystal structures of complexes <b>(1a)</b> and <b>(1b)</b> have been recognized by single-crystal X-ray diffraction investigation. It turned out that the complexes <b>(1b-1)</b> and <b>(1b-2)</b> crystallize together, making a co-crystal <b>1b</b> with an additional EtOH solvent molecule in the crystal structure. A detailed study of intermolecular exchanges was performed using attractive graphical analysis tools such as three-dimensional Hirshfeld surfaces analysis, two-dimensional fingerprint plots (FPs), and enrichment ratios (E), which make C-H … C, C-H … O hydrogen bond, C … O, H … H, and O … O short contacts on Hirshfeld surfaces with color code are observed. Moreover, an appraisement of the inhibitory trace against coronavirus (main protease SARS-CoV-2, PDB ID: 6Y2F) and molecular targets of human angiotensin-converting enzyme-2 (ACE-2) was performed by a molecular docking study in which two nickel complexes performed best for PDB protein ID: 6M0J and all three complexes for PDB protein ID: 6Y2F.</p>\",\"PeriodicalId\":8344,\"journal\":{\"name\":\"Applied Organometallic Chemistry\",\"volume\":\"37 11\",\"pages\":\"\"},\"PeriodicalIF\":3.7000,\"publicationDate\":\"2023-09-24\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Applied Organometallic Chemistry\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/aoc.7254\",\"RegionNum\":2,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, APPLIED\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Applied Organometallic Chemistry","FirstCategoryId":"92","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/aoc.7254","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, APPLIED","Score":null,"Total":0}
Novel dinuclear Ni (II) Schiff base complexes induced noncovalent exchanges: Crystal structure investigation, electrochemical assessment, Hirshfeld surface analysis and SARS-CoV-2 docking study
In this work, novel Ni (II) complexes, namely, [Ni2(L)2(OAc)2(EtOH)2] (1a), [Ni2(L)2(OAc)2(H2O)2] (1b-1) and [Ni2(L)2(OAc)2(EtOH)2] (1b-2) as co-crystal were synthesized by the 1:1 condensation (https://www.sciencedirect.com/topics/chemistry/condensation) of Ni (CH3COO)2·4H2O and Schiff base ligand (H2L) (2-hydroxy-4-methoxybenzaldehyde and 2-amino-2-methylpropanol). The ligand based on Schiff base and fabricated complexes (1a) and (1b-1 and 1b-2) were successfully identified by CHN assessment, FT-IR, UV–Vis spectra, melting point and CV voltammogram. The electrochemical behavior investigation shows that the nickel complexes exhibited irreversible oxidation processes in methanol solution. Additionally, the crystal structures of complexes (1a) and (1b) have been recognized by single-crystal X-ray diffraction investigation. It turned out that the complexes (1b-1) and (1b-2) crystallize together, making a co-crystal 1b with an additional EtOH solvent molecule in the crystal structure. A detailed study of intermolecular exchanges was performed using attractive graphical analysis tools such as three-dimensional Hirshfeld surfaces analysis, two-dimensional fingerprint plots (FPs), and enrichment ratios (E), which make C-H … C, C-H … O hydrogen bond, C … O, H … H, and O … O short contacts on Hirshfeld surfaces with color code are observed. Moreover, an appraisement of the inhibitory trace against coronavirus (main protease SARS-CoV-2, PDB ID: 6Y2F) and molecular targets of human angiotensin-converting enzyme-2 (ACE-2) was performed by a molecular docking study in which two nickel complexes performed best for PDB protein ID: 6M0J and all three complexes for PDB protein ID: 6Y2F.
期刊介绍:
All new compounds should be satisfactorily identified and proof of their structure given according to generally accepted standards. Structural reports, such as papers exclusively dealing with synthesis and characterization, analytical techniques, or X-ray diffraction studies of metal-organic or organometallic compounds will not be considered. The editors reserve the right to refuse without peer review any manuscript that does not comply with the aims and scope of the journal. Applied Organometallic Chemistry publishes Full Papers, Reviews, Mini Reviews and Communications of scientific research in all areas of organometallic and metal-organic chemistry involving main group metals, transition metals, lanthanides and actinides. All contributions should contain an explicit application of novel compounds, for instance in materials science, nano science, catalysis, chemical vapour deposition, metal-mediated organic synthesis, polymers, bio-organometallics, metallo-therapy, metallo-diagnostics and medicine. Reviews of books covering aspects of the fields of focus are also published.