泛癌分析揭示SLC47A1免疫浸润与人类肿瘤临床预后的关系

Nan HUANG , Zheng LIU , Ronghui LI
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引用次数: 0

摘要

目的应用生物信息学方法分析可溶性载体家族47成员1(SLC47A1)在人全癌组织中的差异表达及预后,探讨其对人全癌的预后价值及免疫调节作用。方法利用癌症基因组图谱(TCGA)全癌数据库分析SLC47A1的诊断和预后价值及其表达模式。Pearson相关分析用于评估SLC47A1与基质评分、免疫评分、肿瘤突变负荷(TMB)和微卫星不稳定性(MSI)之间的关系。使用肿瘤免疫系统相互作用数据库(TISDB)分析SLC47A1与特定肿瘤免疫亚型之间的相关性。使用Disease Meth和TCGA Pan-Cancer数据库进行SLC47A1的差异甲基化分析和预后分析。结果SLC47A1在17例肿瘤中异常表达,在11例肿瘤组织中低表达。SLC47A1的低表达与预后和诊断不良有关。此外,SLC47A1也参与了肿瘤微环境的调节。SLC47A1甲基化在15个肿瘤中发生紊乱,紊乱的甲基化与生存率有关。结论总的来说,这些结果表明SLC47A1可能是一种重要的预后生物标志物,并可能与人类肿瘤免疫相关。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Pan-cancer analysis reveals the relationship between SLC47A1 immune infiltration and clinical prognosis of human tumors

Objective

Objective To analyze the differential expression and prognosis of Solute Carrier Family 47 Member 1 (SLC47A1) in human pan-cancer using bioinformatic methods to explore the prognostic value of SLC47A1 for human pan-cancer and to determine its immune regulatory role.

Methods

The Cancer Genome Atlas (TCGA) pan-cancer database was used to analyze the diagnostic and prognostic value of SLC47A1, as well as its expression patterns. Pearson correlation analysis was used to evaluate the relationship between SLC47A1 and stromal scores, immune scores, tumor mutation burden (TMB), and microsatellite instability (MSI). The correlation between SLC47A1 and specific tumor immune subtypes was analyzed using the Tumor-Immune System Interactions Database (TISIDB). Analysis of differential methylation of SLC47A1 and prognostic analyses were performed using the Disease Meth and TCGA Pan-Cancer databases.

Results

SLC47A1 was abnormally expressed in 17 tumors and shows low expression levels in 11 tumor tissues. Low expression of SLC47A1 was associated with poor prognosis and diagnosis. Moreover, SLC47A1 was also involved in tumor microenvironment regulation. SLC47A1 methylation was disordered in 15 tumors, and disordered methylation was associated with survival.

Conclusion

Overall, these results indicate that SLC47A1 may serve as an important prognostic biomarker and may correlate with tumor immunity in human pan-cancer.

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