Ruben Puga-Freitas , Samuel Jacquiod , Manuel Blouin
{"title":"蚯蚓对根际氮循环微生物基因的影响取决于土壤性质","authors":"Ruben Puga-Freitas , Samuel Jacquiod , Manuel Blouin","doi":"10.1016/j.ejsobi.2023.103567","DOIUrl":null,"url":null,"abstract":"<div><p><span>Earthworms are known to improve plant growth in a soil-dependent way, notably via modifications of the rhizosphere microbiota and its functions. We tested the hypothesis that earthworms influence the abundance of microbial genes involved in N cycle according to the type of soil. In three soils with contrasting texture, we quantified five N-cycling genes in different microsites (bulk, rhizosphere or earthworm casts) of microcosms containing (i) neither plants nor eathworms, (ii) plants, (iii) earthworms, (iv) both plant and earthworms. In the presence of earthworms, rhizophere was enriched in nifH (N</span><sub>2</sub><span> fixation) and depressed in nosZ or narG (denitrification) in sandy soil<span>, suggesting a shift in N balance towards immobilization; rhizosphere was enriched in nifH but also nosZ and narG in loamy soil; no effect was detected in clayey soil. The pattern of gene abundance across the different soils and microsites suggests that earthworms could favor microorganisms with a potential beneficial effect on plants specifically in sandy soils.</span></span></p></div>","PeriodicalId":12057,"journal":{"name":"European Journal of Soil Biology","volume":"119 ","pages":"Article 103567"},"PeriodicalIF":3.7000,"publicationDate":"2023-10-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Earthworm effect on rhizosphere N-cycle microbial genes depends on soil properties\",\"authors\":\"Ruben Puga-Freitas , Samuel Jacquiod , Manuel Blouin\",\"doi\":\"10.1016/j.ejsobi.2023.103567\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p><span>Earthworms are known to improve plant growth in a soil-dependent way, notably via modifications of the rhizosphere microbiota and its functions. We tested the hypothesis that earthworms influence the abundance of microbial genes involved in N cycle according to the type of soil. In three soils with contrasting texture, we quantified five N-cycling genes in different microsites (bulk, rhizosphere or earthworm casts) of microcosms containing (i) neither plants nor eathworms, (ii) plants, (iii) earthworms, (iv) both plant and earthworms. In the presence of earthworms, rhizophere was enriched in nifH (N</span><sub>2</sub><span> fixation) and depressed in nosZ or narG (denitrification) in sandy soil<span>, suggesting a shift in N balance towards immobilization; rhizosphere was enriched in nifH but also nosZ and narG in loamy soil; no effect was detected in clayey soil. The pattern of gene abundance across the different soils and microsites suggests that earthworms could favor microorganisms with a potential beneficial effect on plants specifically in sandy soils.</span></span></p></div>\",\"PeriodicalId\":12057,\"journal\":{\"name\":\"European Journal of Soil Biology\",\"volume\":\"119 \",\"pages\":\"Article 103567\"},\"PeriodicalIF\":3.7000,\"publicationDate\":\"2023-10-18\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"European Journal of Soil Biology\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1164556323001036\",\"RegionNum\":2,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ECOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"European Journal of Soil Biology","FirstCategoryId":"97","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1164556323001036","RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ECOLOGY","Score":null,"Total":0}
Earthworm effect on rhizosphere N-cycle microbial genes depends on soil properties
Earthworms are known to improve plant growth in a soil-dependent way, notably via modifications of the rhizosphere microbiota and its functions. We tested the hypothesis that earthworms influence the abundance of microbial genes involved in N cycle according to the type of soil. In three soils with contrasting texture, we quantified five N-cycling genes in different microsites (bulk, rhizosphere or earthworm casts) of microcosms containing (i) neither plants nor eathworms, (ii) plants, (iii) earthworms, (iv) both plant and earthworms. In the presence of earthworms, rhizophere was enriched in nifH (N2 fixation) and depressed in nosZ or narG (denitrification) in sandy soil, suggesting a shift in N balance towards immobilization; rhizosphere was enriched in nifH but also nosZ and narG in loamy soil; no effect was detected in clayey soil. The pattern of gene abundance across the different soils and microsites suggests that earthworms could favor microorganisms with a potential beneficial effect on plants specifically in sandy soils.
期刊介绍:
The European Journal of Soil Biology covers all aspects of soil biology which deal with microbial and faunal ecology and activity in soils, as well as natural ecosystems or biomes connected to ecological interests: biodiversity, biological conservation, adaptation, impact of global changes on soil biodiversity and ecosystem functioning and effects and fate of pollutants as influenced by soil organisms. Different levels in ecosystem structure are taken into account: individuals, populations, communities and ecosystems themselves. At each level, different disciplinary approaches are welcomed: molecular biology, genetics, ecophysiology, ecology, biogeography and landscape ecology.