基于空间模糊聚类水平集的阿尔茨海默病MR图像脑结构分割

Sreelakshmi Shaji, R. Swaminathan
{"title":"基于空间模糊聚类水平集的阿尔茨海默病MR图像脑结构分割","authors":"Sreelakshmi Shaji, R. Swaminathan","doi":"10.34107/yhpn9422.04234","DOIUrl":null,"url":null,"abstract":"Alzheimer’s Disease (AD) is an irreversible neurodegenerative disorder that affects brain structures. Corpus Callosum (CC) atrophy and Lateral ventricle (LV) enlargement are useful structural biomarkers in distinguishing the preclinical stages of AD. The shape of CC appears to be homogeneous from normal controls to AD images and LV shows shape dissimilarity across subjects. Therefore, effective methods to segment CC and LV are essential to characterize the magnitude of morphometric changes. In this study, an attempt has been made to segment CC and LV from MR brain images using the Spatial Fuzzy Clustering based Level Set (SFC-LS) method. For this, T1-weighted MR images of AD, Mild Cognitive Impairment (MCI), and normal controls are obtained from a public database. Spatial fuzzy clustering forms the initial contour for the level set and regularizes the evolution of curve. The segmented images are validated against ground truth using standard measures. Results indicate that SFC-LS is able to segment CC and LV with automated contour initialization. The final contours obtained are sharp and distinct with a high validation performance of accuracy and specificity greater than 97% for normal controls, MCI, and AD. A dice score of 83% and 84% is achieved in segmenting CC and LV respectively. As structural changes in CC and LV have the potential to predict the early stages of AD, the proposed approach seems to be clinically significant.","PeriodicalId":75599,"journal":{"name":"Biomedical sciences instrumentation","volume":" ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2021-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"SEGMENTATION OF BRAIN STRUCTURES IN ALZHEIMER MR IMAGES USING SPATIAL FUZZY CLUSTERING LEVEL SET\",\"authors\":\"Sreelakshmi Shaji, R. Swaminathan\",\"doi\":\"10.34107/yhpn9422.04234\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Alzheimer’s Disease (AD) is an irreversible neurodegenerative disorder that affects brain structures. Corpus Callosum (CC) atrophy and Lateral ventricle (LV) enlargement are useful structural biomarkers in distinguishing the preclinical stages of AD. The shape of CC appears to be homogeneous from normal controls to AD images and LV shows shape dissimilarity across subjects. Therefore, effective methods to segment CC and LV are essential to characterize the magnitude of morphometric changes. In this study, an attempt has been made to segment CC and LV from MR brain images using the Spatial Fuzzy Clustering based Level Set (SFC-LS) method. For this, T1-weighted MR images of AD, Mild Cognitive Impairment (MCI), and normal controls are obtained from a public database. Spatial fuzzy clustering forms the initial contour for the level set and regularizes the evolution of curve. The segmented images are validated against ground truth using standard measures. Results indicate that SFC-LS is able to segment CC and LV with automated contour initialization. The final contours obtained are sharp and distinct with a high validation performance of accuracy and specificity greater than 97% for normal controls, MCI, and AD. A dice score of 83% and 84% is achieved in segmenting CC and LV respectively. As structural changes in CC and LV have the potential to predict the early stages of AD, the proposed approach seems to be clinically significant.\",\"PeriodicalId\":75599,\"journal\":{\"name\":\"Biomedical sciences instrumentation\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2021-04-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Biomedical sciences instrumentation\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.34107/yhpn9422.04234\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biomedical sciences instrumentation","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.34107/yhpn9422.04234","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

阿尔茨海默病(AD)是一种影响大脑结构的不可逆转的神经退行性疾病。胼胝体(CC)萎缩和侧脑室(LV)增大是区分AD临床前阶段的有用结构生物标志物。从正常对照到AD图像,CC的形状似乎是均匀的,LV在受试者之间显示出形状不同。因此,分割CC和LV的有效方法对于表征形态计量学变化的幅度至关重要。在本研究中,尝试使用基于空间模糊聚类的水平集(SFC-LS)方法从MR脑图像中分割CC和LV。为此,从公共数据库中获得AD、轻度认知障碍(MCI)和正常对照的T1加权MR图像。空间模糊聚类形成水平集的初始轮廓,并对曲线的演化进行正则化。使用标准测量根据地面实况对分割的图像进行验证。结果表明,SFC-LS能够通过自动轮廓初始化来分割CC和LV。所获得的最终轮廓清晰明了,对于正常对照、MCI和AD,其准确性和特异性均高于97%。在分割CC和LV时,骰子得分分别为83%和84%。由于CC和LV的结构变化有可能预测AD的早期阶段,因此所提出的方法似乎具有临床意义。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
SEGMENTATION OF BRAIN STRUCTURES IN ALZHEIMER MR IMAGES USING SPATIAL FUZZY CLUSTERING LEVEL SET
Alzheimer’s Disease (AD) is an irreversible neurodegenerative disorder that affects brain structures. Corpus Callosum (CC) atrophy and Lateral ventricle (LV) enlargement are useful structural biomarkers in distinguishing the preclinical stages of AD. The shape of CC appears to be homogeneous from normal controls to AD images and LV shows shape dissimilarity across subjects. Therefore, effective methods to segment CC and LV are essential to characterize the magnitude of morphometric changes. In this study, an attempt has been made to segment CC and LV from MR brain images using the Spatial Fuzzy Clustering based Level Set (SFC-LS) method. For this, T1-weighted MR images of AD, Mild Cognitive Impairment (MCI), and normal controls are obtained from a public database. Spatial fuzzy clustering forms the initial contour for the level set and regularizes the evolution of curve. The segmented images are validated against ground truth using standard measures. Results indicate that SFC-LS is able to segment CC and LV with automated contour initialization. The final contours obtained are sharp and distinct with a high validation performance of accuracy and specificity greater than 97% for normal controls, MCI, and AD. A dice score of 83% and 84% is achieved in segmenting CC and LV respectively. As structural changes in CC and LV have the potential to predict the early stages of AD, the proposed approach seems to be clinically significant.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
0.50
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信