D. Retnoningrum, H. Yoshida, M. D. Razani, V. F. Meidianto, A. Hartanto, A. Artarini, W. Ismaya
{"title":"N73-F124对在金黄色葡萄球菌MnSOD活性中的作用","authors":"D. Retnoningrum, H. Yoshida, M. D. Razani, V. F. Meidianto, A. Hartanto, A. Artarini, W. Ismaya","doi":"10.2174/1573408016999201027212952","DOIUrl":null,"url":null,"abstract":"\n\nBacterial manganese superoxide dismutase (MnSOD) occurs as a dimer,\nwhich is responsible for its activity and stability. Therefore, increasing the dimeric strength would increase\nthe stability of the enzyme while maintaining its activity.\n\n\n\nAn N73F substitution was introduced to strengthen interactions between the monomers at\nthe dimer interface. This substitution would introduce a π-stacking interaction between F73 of one\nmonomer to F124 from the other monomers.\n\n\n\nSite-directed mutagenesis was carried out to substitute N73 with phenylalanine. The activity\nof the mutant was qualitative- and quantitatively checked while the stability was evaluated with a fluorescence-\nbased thermal-shift assay. Finally, the structure of the mutant was elucidated by means of Xray\ncrystallography.\n\n\n\nThe N73F mutant activity was only ~40% of the wild type. The N73F mutant showed one TM\nat 60+1°C while the wild type has two (at 52-55°C and 63-67°C). The crystal structure of the mutant\nshowed the interactions between F73 from one monomer to F124 from the other monomer. The N73F\nstructure presents an enigma because of no change in the enzyme structure including the active site.\nFurthermore, N73 and F124 position and interaction are conserved in human MnSOD but with a different\nlocation in the amino acid sequence. N73 has a role in the enzyme activity, likely related to its interaction\nwith F124, which resides in the active site region but has not been considered to participate in\nthe reaction.\n\n\n\nThe N73F substitution has revealed the unprecedented role of the N73-F124 pair in the\nenzyme activity.\n","PeriodicalId":35405,"journal":{"name":"Current Enzyme Inhibition","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2020-10-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"3","resultStr":"{\"title\":\"Unprecedented Role of the N73-F124 Pair in the Staphylococcus equorum MnSOD Activity\",\"authors\":\"D. Retnoningrum, H. Yoshida, M. D. Razani, V. F. Meidianto, A. Hartanto, A. Artarini, W. Ismaya\",\"doi\":\"10.2174/1573408016999201027212952\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"\\n\\nBacterial manganese superoxide dismutase (MnSOD) occurs as a dimer,\\nwhich is responsible for its activity and stability. Therefore, increasing the dimeric strength would increase\\nthe stability of the enzyme while maintaining its activity.\\n\\n\\n\\nAn N73F substitution was introduced to strengthen interactions between the monomers at\\nthe dimer interface. This substitution would introduce a π-stacking interaction between F73 of one\\nmonomer to F124 from the other monomers.\\n\\n\\n\\nSite-directed mutagenesis was carried out to substitute N73 with phenylalanine. The activity\\nof the mutant was qualitative- and quantitatively checked while the stability was evaluated with a fluorescence-\\nbased thermal-shift assay. Finally, the structure of the mutant was elucidated by means of Xray\\ncrystallography.\\n\\n\\n\\nThe N73F mutant activity was only ~40% of the wild type. The N73F mutant showed one TM\\nat 60+1°C while the wild type has two (at 52-55°C and 63-67°C). The crystal structure of the mutant\\nshowed the interactions between F73 from one monomer to F124 from the other monomer. The N73F\\nstructure presents an enigma because of no change in the enzyme structure including the active site.\\nFurthermore, N73 and F124 position and interaction are conserved in human MnSOD but with a different\\nlocation in the amino acid sequence. N73 has a role in the enzyme activity, likely related to its interaction\\nwith F124, which resides in the active site region but has not been considered to participate in\\nthe reaction.\\n\\n\\n\\nThe N73F substitution has revealed the unprecedented role of the N73-F124 pair in the\\nenzyme activity.\\n\",\"PeriodicalId\":35405,\"journal\":{\"name\":\"Current Enzyme Inhibition\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2020-10-27\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"3\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Current Enzyme Inhibition\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.2174/1573408016999201027212952\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"Pharmacology, Toxicology and Pharmaceutics\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Current Enzyme Inhibition","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.2174/1573408016999201027212952","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"Pharmacology, Toxicology and Pharmaceutics","Score":null,"Total":0}
Unprecedented Role of the N73-F124 Pair in the Staphylococcus equorum MnSOD Activity
Bacterial manganese superoxide dismutase (MnSOD) occurs as a dimer,
which is responsible for its activity and stability. Therefore, increasing the dimeric strength would increase
the stability of the enzyme while maintaining its activity.
An N73F substitution was introduced to strengthen interactions between the monomers at
the dimer interface. This substitution would introduce a π-stacking interaction between F73 of one
monomer to F124 from the other monomers.
Site-directed mutagenesis was carried out to substitute N73 with phenylalanine. The activity
of the mutant was qualitative- and quantitatively checked while the stability was evaluated with a fluorescence-
based thermal-shift assay. Finally, the structure of the mutant was elucidated by means of Xray
crystallography.
The N73F mutant activity was only ~40% of the wild type. The N73F mutant showed one TM
at 60+1°C while the wild type has two (at 52-55°C and 63-67°C). The crystal structure of the mutant
showed the interactions between F73 from one monomer to F124 from the other monomer. The N73F
structure presents an enigma because of no change in the enzyme structure including the active site.
Furthermore, N73 and F124 position and interaction are conserved in human MnSOD but with a different
location in the amino acid sequence. N73 has a role in the enzyme activity, likely related to its interaction
with F124, which resides in the active site region but has not been considered to participate in
the reaction.
The N73F substitution has revealed the unprecedented role of the N73-F124 pair in the
enzyme activity.
期刊介绍:
Current Enzyme Inhibition aims to publish all the latest and outstanding developments in enzyme inhibition studies with regards to the mechanisms of inhibitory processes of enzymes, recognition of active sites, and the discovery of agonists and antagonists, leading to the design and development of new drugs of significant therapeutic value. Each issue contains a series of timely, in-depth reviews written by leaders in the field, covering a range of enzymes that can be exploited for drug development. Current Enzyme Inhibition is an essential journal for every pharmaceutical and medicinal chemist who wishes to have up-to-date knowledge about each and every development in the study of enzyme inhibition.