OdoPlex:用于北美骡鹿(Odocoileus hemionus)和白尾鹿(Odocoileus virginianus)法医鉴定和性别确定的STR多重面板优化和验证

Brian C. Hamlin , Erin P. Meredith , Jeff Rodzen , Jolene M. Strand
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引用次数: 5

摘要

OdoPlex是一种单一的5染料复合面板,用于北美骡鹿(Odocoileus hemionus)和白尾鹿(Odocoileus virginianus)的法医鉴定。这个强大的面板由15个常染色体标记(14个四核苷酸位点和一个二核苷酸位点)和两个性别连锁标记组成。OdoPlex的优化和验证是为了响应美国科学领域委员会组织(OSAC)的研究重点,该组织呼吁为野生动物法医案件中经常遇到的北美物种开发和验证标准化STR面板和相关的等位基因阶梯。共获得了来自18个亚种的1143只白尾鹿和骡鹿的基因型,其中包括Key鹿和哥伦比亚白尾鹿,这是种群管理人员特别感兴趣的两个白尾鹿亚种。完整的STR基因型,包括性别鉴定,仅从125 pg的DNA模板中产生。详细讨论了种级分配方法和考虑种群子结构的单源似然比的计算方法。中位似然比范围为1.65 × 1010 (O. hemionus)至1.58 × 1014 (O. virginianus),使OdoPlex成为一种有效的鹿属个体鉴定方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
OdoPlex: An STR multiplex panel optimized and validated for forensic identification and sex determination of North American mule deer (Odocoileus hemionus) and white-tailed deer (Odocoileus virginianus)

OdoPlex is a single 5-dye multiplex panel for forensic identification of North American mule deer (Odocoileus hemionus) and white-tailed deer (Odocoileus virginianus). This robust panel is comprised of 15 autosomal markers (14 tetranucleotide loci and a single dinucleotide locus) and two sex-linked markers. OdoPlex was optimized and validated in response to the USA-based Organization of Scientific Area Committees (OSAC) research priority calling for the development and validation of standardized STR panels and associated allelic ladders for North American species routinely encountered in wildlife forensic casework. Genotypes were obtained from a combined 1143 white-tailed deer and mule deer representing 18 subspecies, including both the Key deer and Columbian white-tailed deer, two ESA-listed subspecies of white-tailed deer of special interest to population managers. Complete STR genotypes, including sex identification, were generated from as little as 125 pg of DNA template. Methods for species-level assignment and the calculation of single-source likelihood ratios accounting for population substructure are discussed in detail. Median likelihood ratios ranged from 1.65 × 1010 (O. hemionus) to 1.58 × 1014 (O. virginianus), making OdoPlex a powerful assay for individual identification of deer in the genus Odocoileus.

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来源期刊
Forensic science international. Animals and environments
Forensic science international. Animals and environments Pollution, Law, Forensic Medicine, Veterinary Science and Veterinary Medicine (General)
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审稿时长
142 days
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