{"title":"臭氧胁迫反应基因数据库(OSRGD版本1.1):一个文献策划的数据库,用于深入了解植物对臭氧胁迫的反应","authors":"Prachi Yadav, Usha Mina","doi":"10.1016/j.plgene.2022.100368","DOIUrl":null,"url":null,"abstract":"<div><p>Ozone (O<sub>3</sub><span>) is a major abiotic stress<span> which severely affects the growth and development<span> of plants. In order to cope up with ozone stress, plants exhibit a plethora of morphological, physiological and molecular changes. Various molecular studies have been performed and a variety of genes exhibiting expression in response to ozone stress have been identified. However, no existing database has been designed yet to present information on ozone stress responsive genes differentially expressed across different plant species. The lack of a curated database limits the research potential in the area and therefore a cohesive database should be designed as a data repository of the ozone responsive genes. OSRGD ver. 1.1 is a user-friendly web interface to explore ozone stress specific transcriptomic<span> and microarray dataset of different plant species. It allows users to retrieve the ozone stress responsive gene data by keyword-based search. Each entry upon keyword query contains detailed information about the specific species, its foliar injury symptoms, pattern of gene expression, and platform used for gene expression analysis with reference literature. This comprehensive bio-curation will offer researchers a better biological insight into plants' response to ozone stress which will focus on development of climate smart crops through crop breeding. The web interface is freely accessible at </span></span></span></span><span>http://www.osrgd.com</span><svg><path></path></svg>.</p></div>","PeriodicalId":38041,"journal":{"name":"Plant Gene","volume":null,"pages":null},"PeriodicalIF":2.2000,"publicationDate":"2022-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Ozone stress responsive gene database (OSRGD ver. 1.1): A literature curated database for insight into plants' response to ozone stress\",\"authors\":\"Prachi Yadav, Usha Mina\",\"doi\":\"10.1016/j.plgene.2022.100368\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Ozone (O<sub>3</sub><span>) is a major abiotic stress<span> which severely affects the growth and development<span> of plants. In order to cope up with ozone stress, plants exhibit a plethora of morphological, physiological and molecular changes. Various molecular studies have been performed and a variety of genes exhibiting expression in response to ozone stress have been identified. However, no existing database has been designed yet to present information on ozone stress responsive genes differentially expressed across different plant species. The lack of a curated database limits the research potential in the area and therefore a cohesive database should be designed as a data repository of the ozone responsive genes. OSRGD ver. 1.1 is a user-friendly web interface to explore ozone stress specific transcriptomic<span> and microarray dataset of different plant species. It allows users to retrieve the ozone stress responsive gene data by keyword-based search. Each entry upon keyword query contains detailed information about the specific species, its foliar injury symptoms, pattern of gene expression, and platform used for gene expression analysis with reference literature. This comprehensive bio-curation will offer researchers a better biological insight into plants' response to ozone stress which will focus on development of climate smart crops through crop breeding. The web interface is freely accessible at </span></span></span></span><span>http://www.osrgd.com</span><svg><path></path></svg>.</p></div>\",\"PeriodicalId\":38041,\"journal\":{\"name\":\"Plant Gene\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":2.2000,\"publicationDate\":\"2022-09-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Plant Gene\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S235240732200018X\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Plant Gene","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S235240732200018X","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
Ozone stress responsive gene database (OSRGD ver. 1.1): A literature curated database for insight into plants' response to ozone stress
Ozone (O3) is a major abiotic stress which severely affects the growth and development of plants. In order to cope up with ozone stress, plants exhibit a plethora of morphological, physiological and molecular changes. Various molecular studies have been performed and a variety of genes exhibiting expression in response to ozone stress have been identified. However, no existing database has been designed yet to present information on ozone stress responsive genes differentially expressed across different plant species. The lack of a curated database limits the research potential in the area and therefore a cohesive database should be designed as a data repository of the ozone responsive genes. OSRGD ver. 1.1 is a user-friendly web interface to explore ozone stress specific transcriptomic and microarray dataset of different plant species. It allows users to retrieve the ozone stress responsive gene data by keyword-based search. Each entry upon keyword query contains detailed information about the specific species, its foliar injury symptoms, pattern of gene expression, and platform used for gene expression analysis with reference literature. This comprehensive bio-curation will offer researchers a better biological insight into plants' response to ozone stress which will focus on development of climate smart crops through crop breeding. The web interface is freely accessible at http://www.osrgd.com.
Plant GeneAgricultural and Biological Sciences-Plant Science
CiteScore
4.50
自引率
0.00%
发文量
42
审稿时长
51 days
期刊介绍:
Plant Gene publishes papers that focus on the regulation, expression, function and evolution of genes in plants, algae and other photosynthesizing organisms (e.g., cyanobacteria), and plant-associated microorganisms. Plant Gene strives to be a diverse plant journal and topics in multiple fields will be considered for publication. Although not limited to the following, some general topics include: Gene discovery and characterization, Gene regulation in response to environmental stress (e.g., salinity, drought, etc.), Genetic effects of transposable elements, Genetic control of secondary metabolic pathways and metabolic enzymes. Herbal Medicine - regulation and medicinal properties of plant products, Plant hormonal signaling, Plant evolutionary genetics, molecular evolution, population genetics, and phylogenetics, Profiling of plant gene expression and genetic variation, Plant-microbe interactions (e.g., influence of endophytes on gene expression; horizontal gene transfer studies; etc.), Agricultural genetics - biotechnology and crop improvement.