{"title":"来自奥地利Weinebene的铀绿石Ca2Be4(PO4)3(OH)3∙5H2O的晶体结构改进","authors":"Kurt Mereiter, Franz Walter","doi":"10.1007/s00710-022-00806-x","DOIUrl":null,"url":null,"abstract":"<div><p>The crystal structure of uralolite, Ca<sub>2</sub>Be<sub>4</sub>(PO<sub>4</sub>)<sub>3</sub>(OH)<sub>3</sub>·5H<sub>2</sub>O, from the spodumene deposit of Weinebene, Carinthia, Austria, has been refined with X-ray single crystal data gathered on a CCD diffractometer. Uralolite is monoclinic, space group <i>P</i>2<sub>1</sub>/<i>n</i>, <i>a</i> = 6.553(1), <i>b</i> = 16.005(3), <i>c</i> = 15.979(3) Å, <i>β</i> = 101.63(1)°, <i>V</i> = 1641.5(5) Å<sup>3</sup>. While previously only isotropic displacement parameters and no hydrogen atom positions were reported for uralolite, now anisotropic displacement parameters were used for non-hydrogen atoms and hydrogen atoms were located and refined yielding <i>R</i><sub>1</sub> = 0.038 for 3909 observed reflections. Uralolite is built up from corrugated layers [Be<sub>4</sub>(PO<sub>4</sub>)<sub>3</sub>(OH)<sub>3</sub>]<sup>4-</sup> parallel to (010), which contain Z-shaped groups of four BeO<sub>4</sub> tetrahedra sharing corners via three OH groups and are further crosslinked by PO<sub>4</sub> tetrahedra. Two Ca atoms in Ca(O<sub>phosphate</sub>)<sub>5</sub>(H<sub>2</sub>O)<sub>2</sub> coordination and an interstitial water molecule link these layers along [010]. The OH groups and the Ca-bonded H<sub>2</sub>O molecules are all involved in hydrogen bonds with O···O distances of 2.780(2) − 3.063(2) Å and O-H···O angles of 150(1) − 179(1)° excluding a bifurcated bond. The interstitial water molecule displays a distorted tetrahedral environment of O atoms and accepts and donates each two hydrogen bonds. The crystal structure exhibits a <i>C</i>2/<i>c</i> pseudosymmetry for the [Be<sub>4</sub>(PO<sub>4</sub>)<sub>3</sub>(OH)<sub>3</sub>]<sup>4-</sup> layers and the Ca atoms. However, the disposition of the water molecules and an asymmetric hydrogen bond pattern involving OH groups as well as H<sub>2</sub>O molecules are decisive for the lowering of the symmetry of the structure to the true space group <i>P</i>2<sub>1</sub>/<i>n.</i></p></div>","PeriodicalId":18547,"journal":{"name":"Mineralogy and Petrology","volume":"117 2","pages":"181 - 189"},"PeriodicalIF":1.4000,"publicationDate":"2023-02-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://link.springer.com/content/pdf/10.1007/s00710-022-00806-x.pdf","citationCount":"0","resultStr":"{\"title\":\"A crystal structure refinement of uralolite, Ca2Be4(PO4)3(OH)3∙5H2O, from Weinebene, Austria\",\"authors\":\"Kurt Mereiter, Franz Walter\",\"doi\":\"10.1007/s00710-022-00806-x\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>The crystal structure of uralolite, Ca<sub>2</sub>Be<sub>4</sub>(PO<sub>4</sub>)<sub>3</sub>(OH)<sub>3</sub>·5H<sub>2</sub>O, from the spodumene deposit of Weinebene, Carinthia, Austria, has been refined with X-ray single crystal data gathered on a CCD diffractometer. Uralolite is monoclinic, space group <i>P</i>2<sub>1</sub>/<i>n</i>, <i>a</i> = 6.553(1), <i>b</i> = 16.005(3), <i>c</i> = 15.979(3) Å, <i>β</i> = 101.63(1)°, <i>V</i> = 1641.5(5) Å<sup>3</sup>. While previously only isotropic displacement parameters and no hydrogen atom positions were reported for uralolite, now anisotropic displacement parameters were used for non-hydrogen atoms and hydrogen atoms were located and refined yielding <i>R</i><sub>1</sub> = 0.038 for 3909 observed reflections. Uralolite is built up from corrugated layers [Be<sub>4</sub>(PO<sub>4</sub>)<sub>3</sub>(OH)<sub>3</sub>]<sup>4-</sup> parallel to (010), which contain Z-shaped groups of four BeO<sub>4</sub> tetrahedra sharing corners via three OH groups and are further crosslinked by PO<sub>4</sub> tetrahedra. Two Ca atoms in Ca(O<sub>phosphate</sub>)<sub>5</sub>(H<sub>2</sub>O)<sub>2</sub> coordination and an interstitial water molecule link these layers along [010]. The OH groups and the Ca-bonded H<sub>2</sub>O molecules are all involved in hydrogen bonds with O···O distances of 2.780(2) − 3.063(2) Å and O-H···O angles of 150(1) − 179(1)° excluding a bifurcated bond. The interstitial water molecule displays a distorted tetrahedral environment of O atoms and accepts and donates each two hydrogen bonds. The crystal structure exhibits a <i>C</i>2/<i>c</i> pseudosymmetry for the [Be<sub>4</sub>(PO<sub>4</sub>)<sub>3</sub>(OH)<sub>3</sub>]<sup>4-</sup> layers and the Ca atoms. 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引用次数: 0
摘要
利用CCD衍射仪收集到的x射线单晶数据,对奥地利克恩顿州Weinebene锂辉石矿床中乌拉云母Ca2Be4(PO4)3(OH)3·5H2O的晶体结构进行了细化。Uralolite单斜,空间群P21 / n = 6.553 (1), b = 16.005 (3), c = 15.979(3),β= 101.63(1)°,V = 1641.5 (5) A3。以前乌拉云石只报道各向同性位移参数,没有报道氢原子位置,现在使用非氢原子各向异性位移参数,对3909个观测反射进行了氢原子定位和细化,得到R1 = 0.038。乌拉沸石由平行于(010)的波纹层[Be4(PO4)3(OH)3]4-组成,其中包含四个BeO4四面体的z形基团,通过三个OH基团共享角,并进一步由PO4四面体交联。Ca(phosphate)5(H2O)2配位中的两个Ca原子和一个间隙水分子沿着这些层连接起来[010]。氢键中的OH基团和与ca键成键的H2O分子,O··O的距离为2.780(2)~ 3.063(2)Å, O- h··O的角度为150(1)~ 179(1)°(不包括一个分叉键)。间隙水分子表现为O原子的扭曲四面体环境,并分别接受和提供两个氢键。晶体结构表现为[Be4(PO4)3(OH)3]4-层和Ca原子的C2/c赝对称。然而,水分子的配置和OH基团与H2O分子的不对称氢键模式是将结构的对称性降低到真正的空间群P21/n的决定性因素。
A crystal structure refinement of uralolite, Ca2Be4(PO4)3(OH)3∙5H2O, from Weinebene, Austria
The crystal structure of uralolite, Ca2Be4(PO4)3(OH)3·5H2O, from the spodumene deposit of Weinebene, Carinthia, Austria, has been refined with X-ray single crystal data gathered on a CCD diffractometer. Uralolite is monoclinic, space group P21/n, a = 6.553(1), b = 16.005(3), c = 15.979(3) Å, β = 101.63(1)°, V = 1641.5(5) Å3. While previously only isotropic displacement parameters and no hydrogen atom positions were reported for uralolite, now anisotropic displacement parameters were used for non-hydrogen atoms and hydrogen atoms were located and refined yielding R1 = 0.038 for 3909 observed reflections. Uralolite is built up from corrugated layers [Be4(PO4)3(OH)3]4- parallel to (010), which contain Z-shaped groups of four BeO4 tetrahedra sharing corners via three OH groups and are further crosslinked by PO4 tetrahedra. Two Ca atoms in Ca(Ophosphate)5(H2O)2 coordination and an interstitial water molecule link these layers along [010]. The OH groups and the Ca-bonded H2O molecules are all involved in hydrogen bonds with O···O distances of 2.780(2) − 3.063(2) Å and O-H···O angles of 150(1) − 179(1)° excluding a bifurcated bond. The interstitial water molecule displays a distorted tetrahedral environment of O atoms and accepts and donates each two hydrogen bonds. The crystal structure exhibits a C2/c pseudosymmetry for the [Be4(PO4)3(OH)3]4- layers and the Ca atoms. However, the disposition of the water molecules and an asymmetric hydrogen bond pattern involving OH groups as well as H2O molecules are decisive for the lowering of the symmetry of the structure to the true space group P21/n.
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Mineralogy and Petrology welcomes manuscripts from the classical fields of mineralogy, igneous and metamorphic petrology, geochemistry, crystallography, as well as their applications in academic experimentation and research, materials science and engineering, for technology, industry, environment, or society. The journal strongly promotes cross-fertilization among Earth-scientific and applied materials-oriented disciplines. Purely descriptive manuscripts on regional topics will not be considered.
Mineralogy and Petrology was founded in 1872 by Gustav Tschermak as "Mineralogische und Petrographische Mittheilungen". It is one of Europe''s oldest geoscience journals. Former editors include outstanding names such as Gustav Tschermak, Friedrich Becke, Felix Machatschki, Josef Zemann, and Eugen F. Stumpfl.