首株单核增生李斯特菌核心基因组多位点序列型CT2050和CT2051与近缘菌株的比较基因组分析

IF 2.7 Q3 MICROBIOLOGY
O. Nwaiwu
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引用次数: 0

摘要

回顾了作为首批核心基因组多位点序列类型(cgMLST) 2050和2051的3株单核增生乳杆菌的基因组序列,并与21个近缘基因组和参考基因组进行了比较。使用泛基因组方法分析全基因组序列,发现菌株由大约2200个共享基因组成,并且作为辅助基因组存在更大的基因池。在菌株LmNG2 (1/2b)中发现了一个未知的约91 kb的含有杆菌肽抗性基因的可传播序列,该序列显示为Inc18质粒。CT2051的菌株LmNG3 (1/2a)比众所周知的参考菌株LmEGD-e (1/2a)拥有更多的独特基因(252对230)。更多监测新菌株的研究可以帮助减少食源性疾病的爆发。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Comparative genome analysis of the first Listeria monocytogenes core genome multi-locus sequence types CT2050 AND CT2051 strains with their close relatives
Genome sequences of the three strains of L. monocytogenes, which are the first core genome multi-locus sequence types (cgMLST) 2050 and 2051 were reviewed and compared with 21 close relatives and reference genomes. Using a pan-genomic approach to analyse whole genome sequences, it was found that the strains consisted of approximately 2200 shared genes and a much greater pool of genes present as an accessory genome. An unknown transmissible sequence of approximately 91 kb harbouring bacitracin resistance genes found in strain LmNG2 (1/2b) was revealed to be an Inc18 plasmid. The CT2051, strain LmNG3 (1/2a) haboured more unique genes (252 vs 230) than the well-known reference strain LmEGD-e (1/2a). More studies to monitor new strains can help reduce food-borne outbreaks.
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来源期刊
AIMS Microbiology
AIMS Microbiology MICROBIOLOGY-
CiteScore
7.00
自引率
2.10%
发文量
22
审稿时长
8 weeks
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