Tae Yeul Kim, HongBi Yu, M. Phan, Ja-Hyun Jang, D. Cho
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引用次数: 4
摘要
背景:新一代测序(NGS)技术最近被引入血型基因分型;然而,在现实世界的临床环境中使用基于ngs的血型基因分型的研究很少。在本研究中,我们将基于ngs的血型基因分型应用于临床常规遇到的各种免疫血液学病例。方法:选取4例免疫血液学病例:ABO亚群、ABO嵌合、高频抗原抗体(HFA)和抗cd47干扰。我们设计了一个基于杂交捕获的NGS面板,针对39个血型相关基因,并应用于4例。结果:NGS分析在el表型患者中发现了一个新的内含子变异(NM_020469.3:c.29-10T>G),并在异卵双胞胎中检测到一小部分ABO*A1.02(约3-6%)与ABO*B.01/O.01.02共存。此外,NGS分析还发现了一个纯合的停止增益变异(NM_004827.3:c)。376 c > T, p.Gln126 *;HFA抗体患者的ABCG2*01N.01);因此,该患者的表型预测为Jr(a−)。最后,2例使用抗cd47药物治疗的患者,NGS预测的血型表型与血清学结果一致。结论:基于ngs的血型基因分型可用于ABO亚群等位基因、低水平血型嵌合和hfa抗体的鉴定。此外,它还可以应用于抗cd47药物治疗患者的扩展血型抗原匹配。
Application of Blood Group Genotyping by Next-Generation Sequencing in Various Immunohaematology Cases
Background: Next-generation sequencing (NGS) technology has been recently introduced into blood group genotyping; however, there are few studies using NGS-based blood group genotyping in real-world clinical settings. In this study, we applied NGS-based blood group genotyping into various immunohaematology cases encountered in routine clinical practice. Methods: This study included 4 immunohaematology cases: ABO subgroup, ABO chimerism, antibody to a high-frequency antigen (HFA), and anti-CD47 interference. We designed a hybridization capture-based NGS panel targeting 39 blood group-related genes and applied it to the 4 cases. Results: NGS analysis revealed a novel intronic variant (NM_020469.3:c.29-10T>G) in a patient with an Ael phenotype and detected a small fraction of ABO*A1.02 (approximately 3–6%) coexisting with the major genotype ABO*B.01/O.01.02 in dizygotic twins. In addition, NGS analysis found a homozygous stop-gain variant (NM_004827.3:c.376C>T, p.Gln126*; ABCG2*01N.01) in a patient with an antibody to an HFA; consequently, this patient’s phenotype was predicted as Jr(a−). Lastly, blood group phenotypes predicted by NGS were concordant with those determined by serology in 2 patients treated with anti-CD47 drugs. Conclusion: NGS-based blood group genotyping can be used for identifying ABO subgroup alleles, low levels of blood group chimerism, and antibodies to HFAs. Furthermore, it can be applied to extended blood group antigen matching for patients treated with anti-CD47 drugs.
期刊介绍:
This journal is devoted to all areas of transfusion medicine. These include the quality and security of blood products, therapy with blood components and plasma derivatives, transfusion-related questions in transplantation, stem cell manipulation, therapeutic and diagnostic problems of homeostasis, immuno-hematological investigations, and legal aspects of the production of blood products as well as hemotherapy. Both comprehensive reviews and primary publications that detail the newest work in transfusion medicine and hemotherapy promote the international exchange of knowledge within these disciplines. Consistent with this goal, continuing clinical education is also specifically addressed.