根据线粒体DNA推断墨西哥西北部奇尔胡伊海鲶鱼Bagre panamensis的遗传多样性、种群结构和种群历史。

Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis Pub Date : 2021-07-01 Epub Date: 2023-11-28
Karla Isela Arroyo-Zúñiga, Jasmín Granados-Amores, Deivis Samuel Palacios-Salgado, Viridiana Peraza-Gómez, Fausto Valenzuela-Quiñonez
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引用次数: 0

摘要

chilhuil海鲶鱼(Bagre panamensis)是一种与生态相关的物种,有助于其栖息的生态系统的结构、组织和功能。此外,它也是墨西哥太平洋沿岸重要的手工渔业资源。本研究旨在确定墨西哥太平洋巴拿马B.panamensis的遗传多样性、种群结构和历史人口学。线粒体DNA从r16S和COI两个不同的区域扩增,得到1142 串联基因的bp。r16S的遗传多样性水平较低(H=12;H=0.131;π=0.0003),COI的遗传多样度水平较高(H=57;H=0.9128;π=0.0039)和连锁基因片段(H=62;H=0.307;π=0.0023)。此外,历史人口学分析(Tajima的D、Fu的Fs、错配分布和贝叶斯天际线图分析)支持了所研究物种的种群扩张情景。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Genetic diversity, population structure, and demographic history of the chilhuil sea catfish Bagre panamensis in Northwestern Mexico inferred from mitochondrial DNA.

The chilhuil sea catfish (Bagre panamensis) is an ecologically relevant species contributing to the structure, organization, and functioning of the ecosystems it inhabits. Also, it is an important artisanal fishery resource in the Mexican Pacific coast. This study aimed to determine the genetic diversity, population structure, and historical demography of B. panamensis in the Mexican Pacific. The mitochondrial DNA was amplified from two distinct regions, r16S and COI, resulting in an 1142 bp of the concatenated genes. Low genetic diversity levels were detected for r16S (H = 12; h = 0.131; π = 0.0003) and high genetic diversity levels for COI (H = 57; h = 0.9128; π = 0.0039) and the concatenated gene fragments (H = 62; h = 0.9307; π = 0.0023). Population structure analysis indicated 'panmixia' for B. panamensis along the Mexican Pacific. Furthermore, historical demographic analysis (Tajima's D, Fu's Fs, mismatch distribution, and Bayesian Skyline plot analyses) supported a population expansion scenario for the studied species.

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