揭示枝藻化合物的相互作用机制以识别潜在的杀幼虫和杀菌活性:体外和硅方法。

IF 2.5 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Molecular Biotechnology Pub Date : 2025-08-01 Epub Date: 2023-10-16 DOI:10.1007/s12033-023-00902-z
K T Nachammai, S Amaradeepa, S Raageshwari, A V Swathilakshmi, M Poonkothai, K Langeswaran
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引用次数: 0

摘要

本研究旨在通过体外和计算机模拟方法验证Cladophora sp的杀幼虫和抗菌潜力。通过FT-IR和GC-MS分析评估了植物成分、官能团以及负责抗菌和杀幼虫活性的化合物的存在,揭示了活性次级代谢产物、羟基、烷烃和羰基的存在。对藻类提取物的杀幼虫和抗菌活性进行了检测,发现其对致倦库蚊和大肠杆菌具有完全的死亡率和显著的抑制区。为了支持体外研究,进行了计算机研究。从GC-MS中选择的化合物的分子对接研究显示出与药物相似性和ADMET特性的良好一致性,表明其与杀幼虫和细菌蛋白的强大相互作用显示出相当大的结合亲和力。值得注意的是,1,2,4-恶二唑,3-(1,3-苯并二氧唑-5-基)-5-[(4-碘-1H-吡唑-1-基)甲基]-与靶蛋白表现出强烈的相互作用。密度泛函理论揭示了铅化合物的能隙减小,证实了分子间电荷转移的发生。分子动力学模拟证实了铅化合物的稳定性和柔韧性。因此,本研究为枝藻的分子相互作用提供了计算视角,表明其适合作为一种有前途的生物防治剂。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Unraveling the Interaction Mechanism of the Compounds From Cladophora sp to Recognize Prospective Larvicidal and Bactericidal Activities: In vitro and In Silico Approaches.

The present investigation aims to validate the larvicidal and antibacterial potential of Cladophora sp through in vitro and in silico approaches. The presence of phytoconstituents, functional groups and the compounds responsible for antibacterial and larvicidal activity were assessed through FT-IR and GC-MS analyses which unveiled the existence of active secondary metabolites, hydroxyl, alkane and carbonyl groups. The larvicidal and antibacterial activity of algal extract were examined and revealed complete mortality and substantial zone of inhibition was observed against Culex quinquefasciatus and E. coli. To support the in vitro investigation in silico studies were performed. Molecular docking investigations of the selected compounds from GC-MS which exhibited favorable agreement with drug likeness and ADMET properties indicated robust interactions with the larvicidal and bacterial proteins showcasing considerable binding affinities. Notably, 1,2,4-Oxadiazole, 3-(1,3-benzodioxol-5-yl)-5-[(4-iodo-1H-pyrazol-1-yl) methyl]- exhibited strong interactions with the target proteins. Density Functional Theory revealed that the energy gap of the lead compound was reduced and substantiates the occurrence of intermolecular charge transfer. Molecular Dynamic simulations confirms the stability and flexibility of the lead compound. Hence, this investigation offers computational perspectives on the molecular interactions of Cladophora sp, suggesting its suitability as a promising biocontrol agent.

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来源期刊
Molecular Biotechnology
Molecular Biotechnology 医学-生化与分子生物学
CiteScore
4.10
自引率
3.80%
发文量
165
审稿时长
6 months
期刊介绍: Molecular Biotechnology publishes original research papers on the application of molecular biology to both basic and applied research in the field of biotechnology. Particular areas of interest include the following: stability and expression of cloned gene products, cell transformation, gene cloning systems and the production of recombinant proteins, protein purification and analysis, transgenic species, developmental biology, mutation analysis, the applications of DNA fingerprinting, RNA interference, and PCR technology, microarray technology, proteomics, mass spectrometry, bioinformatics, plant molecular biology, microbial genetics, gene probes and the diagnosis of disease, pharmaceutical and health care products, therapeutic agents, vaccines, gene targeting, gene therapy, stem cell technology and tissue engineering, antisense technology, protein engineering and enzyme technology, monoclonal antibodies, glycobiology and glycomics, and agricultural biotechnology.
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