通过全外显子组测序在POI家族中鉴定的LAMC1中的一种新的错义变体。

IF 2 4区 医学 Q3 ENDOCRINOLOGY & METABOLISM
Gynecological Endocrinology Pub Date : 2023-10-10 Epub Date: 2023-10-15 DOI:10.1080/09513590.2023.2265507
Huanfang Xu, Chunyan Wang, Han Wei, Tengyan Li, Yigong Fang, Binbin Wang
{"title":"通过全外显子组测序在POI家族中鉴定的LAMC1中的一种新的错义变体。","authors":"Huanfang Xu,&nbsp;Chunyan Wang,&nbsp;Han Wei,&nbsp;Tengyan Li,&nbsp;Yigong Fang,&nbsp;Binbin Wang","doi":"10.1080/09513590.2023.2265507","DOIUrl":null,"url":null,"abstract":"<p><strong>Objective: </strong>This study aimed to identify novel pathogenic genes and variants in a Chinese family with premature ovarian insufficiency (POI).</p><p><strong>Methods: </strong>A Chinese POI family was enrolled in this study. Whole exome sequencing was performed on the proband and her mother to identify the potential causative genes and variants and Sanger sequencing was used to confirm the finally identified potential pathogenic variant in the family.</p><p><strong>Results: </strong>An assessment of the family pedigree suggested that POI was inherited in an autosomal dominant manner in this family. A novel missense variant of the laminin subunit gamma-1 gene (<i>LAMC1</i>; NM_002293.4: c.3281A > T, p.D1094V) was finally identified in the proband and her affected mother. This variant was not found in any public databases. <i>In silico</i> analysis indicated the amino acid encoded at the variant site was highly conserved among mammals and associated with decreased protein stability and disrupted protein function. Its presence in the POI family was confirmed by Sanger sequencing.</p><p><strong>Conclusions: </strong>This study firstly reported a novel missense variant of <i>LAMC1</i> in a Chinese POI family, which was inherited in an autosomal dominant manner. This variant may result in the development of POI. Our results provide supporting evidence for a causative role for <i>LAMC1</i> variants in POI.</p>","PeriodicalId":12865,"journal":{"name":"Gynecological Endocrinology","volume":null,"pages":null},"PeriodicalIF":2.0000,"publicationDate":"2023-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"A novel missense variant in LAMC1 identified in a POI family by whole exome sequencing.\",\"authors\":\"Huanfang Xu,&nbsp;Chunyan Wang,&nbsp;Han Wei,&nbsp;Tengyan Li,&nbsp;Yigong Fang,&nbsp;Binbin Wang\",\"doi\":\"10.1080/09513590.2023.2265507\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Objective: </strong>This study aimed to identify novel pathogenic genes and variants in a Chinese family with premature ovarian insufficiency (POI).</p><p><strong>Methods: </strong>A Chinese POI family was enrolled in this study. Whole exome sequencing was performed on the proband and her mother to identify the potential causative genes and variants and Sanger sequencing was used to confirm the finally identified potential pathogenic variant in the family.</p><p><strong>Results: </strong>An assessment of the family pedigree suggested that POI was inherited in an autosomal dominant manner in this family. A novel missense variant of the laminin subunit gamma-1 gene (<i>LAMC1</i>; NM_002293.4: c.3281A > T, p.D1094V) was finally identified in the proband and her affected mother. This variant was not found in any public databases. <i>In silico</i> analysis indicated the amino acid encoded at the variant site was highly conserved among mammals and associated with decreased protein stability and disrupted protein function. Its presence in the POI family was confirmed by Sanger sequencing.</p><p><strong>Conclusions: </strong>This study firstly reported a novel missense variant of <i>LAMC1</i> in a Chinese POI family, which was inherited in an autosomal dominant manner. This variant may result in the development of POI. Our results provide supporting evidence for a causative role for <i>LAMC1</i> variants in POI.</p>\",\"PeriodicalId\":12865,\"journal\":{\"name\":\"Gynecological Endocrinology\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2023-10-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Gynecological Endocrinology\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1080/09513590.2023.2265507\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2023/10/15 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q3\",\"JCRName\":\"ENDOCRINOLOGY & METABOLISM\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Gynecological Endocrinology","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1080/09513590.2023.2265507","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2023/10/15 0:00:00","PubModel":"Epub","JCR":"Q3","JCRName":"ENDOCRINOLOGY & METABOLISM","Score":null,"Total":0}
引用次数: 0

摘要

目的:本研究旨在鉴定一个中国卵巢早衰(POI)家族中的新致病基因和变异。对先证者及其母亲进行全外显子组测序,以确定潜在的致病基因和变异,并使用Sanger测序来确认家族中最终确定的潜在致病变异。结果:对家族谱系的评估表明,POI在该家族中以常染色体显性遗传。层粘连蛋白亚单位γ-1基因的一种新的错义变体(LAMC1;NM_002293.4:c.3281A > T、 p.D1094V)最终在先证者及其受影响的母亲中被鉴定。在任何公共数据库中都没有找到此变体。计算机分析表明,变体位点编码的氨基酸在哺乳动物中高度保守,与蛋白质稳定性降低和蛋白质功能紊乱有关。通过Sanger测序证实了其在POI家族中的存在。结论:本研究首次在中国POI家族中报道了LAMC1的一个新的错义变体,该变体以常染色体显性遗传方式遗传。这种变体可能导致POI的发展。我们的研究结果为LAMC1变体在POI中的致病作用提供了支持性证据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A novel missense variant in LAMC1 identified in a POI family by whole exome sequencing.

Objective: This study aimed to identify novel pathogenic genes and variants in a Chinese family with premature ovarian insufficiency (POI).

Methods: A Chinese POI family was enrolled in this study. Whole exome sequencing was performed on the proband and her mother to identify the potential causative genes and variants and Sanger sequencing was used to confirm the finally identified potential pathogenic variant in the family.

Results: An assessment of the family pedigree suggested that POI was inherited in an autosomal dominant manner in this family. A novel missense variant of the laminin subunit gamma-1 gene (LAMC1; NM_002293.4: c.3281A > T, p.D1094V) was finally identified in the proband and her affected mother. This variant was not found in any public databases. In silico analysis indicated the amino acid encoded at the variant site was highly conserved among mammals and associated with decreased protein stability and disrupted protein function. Its presence in the POI family was confirmed by Sanger sequencing.

Conclusions: This study firstly reported a novel missense variant of LAMC1 in a Chinese POI family, which was inherited in an autosomal dominant manner. This variant may result in the development of POI. Our results provide supporting evidence for a causative role for LAMC1 variants in POI.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Gynecological Endocrinology
Gynecological Endocrinology 医学-妇产科学
CiteScore
4.40
自引率
5.00%
发文量
137
审稿时长
3-6 weeks
期刊介绍: Gynecological Endocrinology , the official journal of the International Society of Gynecological Endocrinology, covers all the experimental, clinical and therapeutic aspects of this ever more important discipline. It includes, amongst others, papers relating to the control and function of the different endocrine glands in females, the effects of reproductive events on the endocrine system, and the consequences of endocrine disorders on reproduction
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信