基于基因组信息的多发性骨髓瘤药物基因鉴定。

Genomics & informatics Pub Date : 2023-09-01 Epub Date: 2023-09-27 DOI:10.5808/gi.23011
Rahmat Dani Satria, Lalu Muhammad Irham, Wirawan Adikusuma, Anisa Nova Puspitaningrum, Arief Rahman Afief, Riat El Khair, Abdi Wira Septama
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引用次数: 0

摘要

多发性骨髓瘤(MM)是一种血液系统恶性肿瘤。正如许多研究所调查的那样,人们普遍认为遗传因素在MM的发展中起着重要作用。然而,基因组信息在临床上的应用,包括诊断和预后生物标志物,在很大程度上仍局限于研究。在这项研究中,我们利用了多发性骨髓瘤基因组驱动临床实施数据库中的遗传信息,该数据库专门用于MM的临床试验研究。这些遗传信息来源于全基因组关联研究目录数据库。根据已建立的注释,我们将有可能导致MM的基因以及MM的生物风险基因列为潜在的药物靶点候选基因。DrugBank数据库用于识别针对这些基因的候选药物。我们的研究发现了14个MM生物风险基因,并鉴定了10种针对其中3个基因的药物。值得注意的是,这10种药物中只有一种帕诺司他被批准用于MM。四种药物(环孢菌素、贝利诺司他、伏诺司他和罗米德辛)靶向了两个最有前途的基因,钙信号调节亲环蛋白配体(CAMLG)和组蛋白脱乙酰酶2(HDAC2),所有这些药物都有临床证据支持它们用于治疗MM。有趣的是,10种药物中有5种已被批准用于MM以外的其他适应症,但它们也可能对治疗MM有效。因此,本研究旨在阐明参与MM发病机制的基因组变异,并强调这些基因组变异在药物发现中的潜在益处。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Identification of druggable genes for multiple myeloma based on genomic information.

Identification of druggable genes for multiple myeloma based on genomic information.

Identification of druggable genes for multiple myeloma based on genomic information.

Identification of druggable genes for multiple myeloma based on genomic information.

Multiple myeloma (MM) is a hematological malignancy. It is widely believed that genetic factors play a significant role in the development of MM, as investigated in numerous studies. However, the application of genomic information for clinical purposes, including diagnostic and prognostic biomarkers, remains largely confined to research. In this study, we utilized genetic information from the Genomic-Driven Clinical Implementation for Multiple Myeloma database, which is dedicated to clinical trial studies on MM. This genetic information was sourced from the genome-wide association studies catalog database. We prioritized genes with the potential to cause MM based on established annotations, as well as biological risk genes for MM, as potential drug target candidates. The DrugBank database was employed to identify drug candidates targeting these genes. Our research led to the discovery of 14 MM biological risk genes and the identification of 10 drugs that target three of these genes. Notably, only one of these 10 drugs, panobinostat, has been approved for use in MM. The two most promising genes, calcium signal-modulating cyclophilin ligand (CAMLG) and histone deacetylase 2 (HDAC2), were targeted by four drugs (cyclosporine, belinostat, vorinostat, and romidepsin), all of which have clinical evidence supporting their use in the treatment of MM. Interestingly, five of the 10 drugs have been approved for other indications than MM, but they may also be effective in treating MM. Therefore, this study aimed to clarify the genomic variants involved in the pathogenesis of MM and highlight the potential benefits of these genomic variants in drug discovery.

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