祖先序列重建作为研究木材腐朽真菌进化的工具。

IF 2.1 Q3 MYCOLOGY
Frontiers in fungal biology Pub Date : 2022-10-14 eCollection Date: 2022-01-01 DOI:10.3389/ffunb.2022.1003489
Iván Ayuso-Fernández, Gonzalo Molpeceres, Susana Camarero, Francisco Javier Ruiz-Dueñas, Angel T Martínez
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引用次数: 1

摘要

进化研究受到现有技术的限制。除了使用化石记录外,分子系统发育学还可以使用基因、基因组和蛋白质对进化史进行详细描述。然而,这些工具提供了感兴趣的生物体和系统的稀缺生物化学信息,因此在解释蛋白质进化时非常有限。在过去的十年里,祖先序列重建(ASR)方法的发展克服了这一限制。ASR允许从现已灭绝的生物体中推断出的蛋白质在实验室中复活,成为研究酶进化的杰出工具。本文综述了ASR方法的最新进展及其在真菌进化研究中的应用,特别关注木材腐朽真菌作为全球碳循环中的重要生物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Ancestral sequence reconstruction as a tool to study the evolution of wood decaying fungi.

Ancestral sequence reconstruction as a tool to study the evolution of wood decaying fungi.

Ancestral sequence reconstruction as a tool to study the evolution of wood decaying fungi.

Ancestral sequence reconstruction as a tool to study the evolution of wood decaying fungi.

The study of evolution is limited by the techniques available to do so. Aside from the use of the fossil record, molecular phylogenetics can provide a detailed characterization of evolutionary histories using genes, genomes and proteins. However, these tools provide scarce biochemical information of the organisms and systems of interest and are therefore very limited when they come to explain protein evolution. In the past decade, this limitation has been overcome by the development of ancestral sequence reconstruction (ASR) methods. ASR allows the subsequent resurrection in the laboratory of inferred proteins from now extinct organisms, becoming an outstanding tool to study enzyme evolution. Here we review the recent advances in ASR methods and their application to study fungal evolution, with special focus on wood-decay fungi as essential organisms in the global carbon cycling.

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CiteScore
2.70
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