突变偏差的变化通过改变适应度效应的分布来促进突变。

IF 2.4 2区 环境科学与生态学 Q2 ECOLOGY
American Naturalist Pub Date : 2023-10-01 Epub Date: 2023-08-23 DOI:10.1086/726010
Marwa Z Tuffaha, Saranya Varakunan, David Castellano, Ryan N Gutenkunst, Lindi M Wahl
{"title":"突变偏差的变化通过改变适应度效应的分布来促进突变。","authors":"Marwa Z Tuffaha, Saranya Varakunan, David Castellano, Ryan N Gutenkunst, Lindi M Wahl","doi":"10.1086/726010","DOIUrl":null,"url":null,"abstract":"<p><p>AbstractRecent experimental evidence demonstrates that shifts in mutational biases-for example, increases in transversion frequency-can change the distribution of fitness effects of mutations (DFE). In particular, reducing or reversing a prevailing bias can increase the probability that a de novo mutation is beneficial. It has also been shown that mutator bacteria are more likely to emerge if the beneficial mutations they generate have a larger effect size than observed in the wild type. Here, we connect these two results, demonstrating that mutator strains that reduce or reverse a prevailing bias have a positively shifted DFE, which in turn can dramatically increase their emergence probability. Since changes in mutation rate and bias are often coupled through the gain and loss of DNA repair enzymes, our results predict that the invasion of mutator strains will be facilitated by shifts in mutation bias that offer improved access to previously undersampled beneficial mutations.</p>","PeriodicalId":50800,"journal":{"name":"American Naturalist","volume":"202 4","pages":"503-518"},"PeriodicalIF":2.4000,"publicationDate":"2023-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11288183/pdf/","citationCount":"0","resultStr":"{\"title\":\"Shifts in Mutation Bias Promote Mutators by Altering the Distribution of Fitness Effects.\",\"authors\":\"Marwa Z Tuffaha, Saranya Varakunan, David Castellano, Ryan N Gutenkunst, Lindi M Wahl\",\"doi\":\"10.1086/726010\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>AbstractRecent experimental evidence demonstrates that shifts in mutational biases-for example, increases in transversion frequency-can change the distribution of fitness effects of mutations (DFE). In particular, reducing or reversing a prevailing bias can increase the probability that a de novo mutation is beneficial. It has also been shown that mutator bacteria are more likely to emerge if the beneficial mutations they generate have a larger effect size than observed in the wild type. Here, we connect these two results, demonstrating that mutator strains that reduce or reverse a prevailing bias have a positively shifted DFE, which in turn can dramatically increase their emergence probability. Since changes in mutation rate and bias are often coupled through the gain and loss of DNA repair enzymes, our results predict that the invasion of mutator strains will be facilitated by shifts in mutation bias that offer improved access to previously undersampled beneficial mutations.</p>\",\"PeriodicalId\":50800,\"journal\":{\"name\":\"American Naturalist\",\"volume\":\"202 4\",\"pages\":\"503-518\"},\"PeriodicalIF\":2.4000,\"publicationDate\":\"2023-10-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11288183/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"American Naturalist\",\"FirstCategoryId\":\"93\",\"ListUrlMain\":\"https://doi.org/10.1086/726010\",\"RegionNum\":2,\"RegionCategory\":\"环境科学与生态学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2023/8/23 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q2\",\"JCRName\":\"ECOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"American Naturalist","FirstCategoryId":"93","ListUrlMain":"https://doi.org/10.1086/726010","RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2023/8/23 0:00:00","PubModel":"Epub","JCR":"Q2","JCRName":"ECOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

最近的实验证据表明,突变偏差的变化,例如,颠换频率的增加,可以改变突变适应度效应(DFE)的分布。特别是,减少或逆转普遍的偏见可以增加新突变有益的可能性。研究还表明,如果突变细菌产生的有益突变比在野生型中观察到的效果更大,那么它们更有可能出现。在这里,我们将这两个结果联系起来,证明减少或逆转普遍偏见的突变菌株具有正迁移的DFE,这反过来可以显著增加它们的出现概率。由于突变率和偏倚的变化通常是通过DNA修复酶的获得和损失来耦合的,我们的结果预测,突变偏倚的改变将促进突变菌株的入侵,从而改善对先前样本不足的有益突变的获取。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Shifts in Mutation Bias Promote Mutators by Altering the Distribution of Fitness Effects.

AbstractRecent experimental evidence demonstrates that shifts in mutational biases-for example, increases in transversion frequency-can change the distribution of fitness effects of mutations (DFE). In particular, reducing or reversing a prevailing bias can increase the probability that a de novo mutation is beneficial. It has also been shown that mutator bacteria are more likely to emerge if the beneficial mutations they generate have a larger effect size than observed in the wild type. Here, we connect these two results, demonstrating that mutator strains that reduce or reverse a prevailing bias have a positively shifted DFE, which in turn can dramatically increase their emergence probability. Since changes in mutation rate and bias are often coupled through the gain and loss of DNA repair enzymes, our results predict that the invasion of mutator strains will be facilitated by shifts in mutation bias that offer improved access to previously undersampled beneficial mutations.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
American Naturalist
American Naturalist 环境科学-进化生物学
CiteScore
5.40
自引率
3.40%
发文量
194
审稿时长
3 months
期刊介绍: Since its inception in 1867, The American Naturalist has maintained its position as one of the world''s premier peer-reviewed publications in ecology, evolution, and behavior research. Its goals are to publish articles that are of broad interest to the readership, pose new and significant problems, introduce novel subjects, develop conceptual unification, and change the way people think. AmNat emphasizes sophisticated methodologies and innovative theoretical syntheses—all in an effort to advance the knowledge of organic evolution and other broad biological principles.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信