Dimitry Y. Sorokin , Michail Yakimov , Enzo Messina , Alexander Y. Merkel , Michel Koenen , Nicole J. Bale , Jaap S. Sinninghe Damsté
{"title":"Natranaeroarchaeum sulfidigenes gen. nov., sp. nov.,来自高盐碱湖的碳水化合物利用硫呼吸的盐古菌,Natranaeroarchaeum sulfidigenes家族新成员。11 .盐杆菌目","authors":"Dimitry Y. Sorokin , Michail Yakimov , Enzo Messina , Alexander Y. Merkel , Michel Koenen , Nicole J. Bale , Jaap S. Sinninghe Damsté","doi":"10.1016/j.syapm.2022.126356","DOIUrl":null,"url":null,"abstract":"<div><p>A pure culture of alkaliphilic haloarchaeon strain AArc-S<sup>T</sup> capable of anaerobic growth by carbohydrate-dependent sulfur respiration was obtained from hypersaline lakes in southwestern Siberia. According to phylogenetic analysis, AArc-S<sup>T</sup> formed a new genus level branch most related to the genus <em>Natronoarchaeum</em> in the order <em>Halobacteriales</em>. The strain is facultatively anaerobic with strictly respiratory metabolism growing either by anaerobic respiration with elemental sulfur and thiosulfate as the electron acceptors or by aerobic respiration at microoxic conditions. Thiosulfate is reduced partially to sulfide and sulfite. It is a first sulfur-reducing alkaliphilic haloarchaeon utilizing sugars, starch and glycerol as substrates for anaerobic growth. It is extremely halophilic (optimum at 3.5 M total Na<sup>+</sup>) and obligately alkaliphilic (optimum at pH 9.5). The dominant polar lipids include PG and PGP-Me with the archaeol (C<sub>20</sub>-C<sub>20</sub>) or extended archaeol (C<sub>20</sub>-C<sub>25</sub>) cores. The dominant respiratory lipoquinone is MK-8:8. On the basis of unique physiological properties and results of phylogenetic analysis, the soda lake isolate is suggested to be classified into a novel genus and species <em>Natranaeroarchaeum sulfidigenes</em> gen. nov., sp. nov. (=JCM 34033<sup>T</sup> = UNIQEM U1000<sup>T</sup>). Furthermore, on the bases of phylogenomic reconstruction, a new family <em>Natronoarchaeaceae</em> fam. nov. is proposed within the order <em>Halobacteriales</em> incorporating <em>Natranaeroarchaeum</em> and three related genera: <em>Natronoarchaeum</em>, <em>Salinarchaeum</em> and <em>Halostella</em>.</p></div>","PeriodicalId":3,"journal":{"name":"ACS Applied Electronic Materials","volume":null,"pages":null},"PeriodicalIF":4.3000,"publicationDate":"2022-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0723202022000637/pdfft?md5=98a965f95613b1fd801f0d883cf0a440&pid=1-s2.0-S0723202022000637-main.pdf","citationCount":"5","resultStr":"{\"title\":\"Natranaeroarchaeum sulfidigenes gen. nov., sp. nov., carbohydrate-utilizing sulfur-respiring haloarchaeon from hypersaline soda lakes, a member of a new family Natronoarchaeaceae fam. nov. in the order Halobacteriales\",\"authors\":\"Dimitry Y. Sorokin , Michail Yakimov , Enzo Messina , Alexander Y. Merkel , Michel Koenen , Nicole J. Bale , Jaap S. Sinninghe Damsté\",\"doi\":\"10.1016/j.syapm.2022.126356\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>A pure culture of alkaliphilic haloarchaeon strain AArc-S<sup>T</sup> capable of anaerobic growth by carbohydrate-dependent sulfur respiration was obtained from hypersaline lakes in southwestern Siberia. According to phylogenetic analysis, AArc-S<sup>T</sup> formed a new genus level branch most related to the genus <em>Natronoarchaeum</em> in the order <em>Halobacteriales</em>. The strain is facultatively anaerobic with strictly respiratory metabolism growing either by anaerobic respiration with elemental sulfur and thiosulfate as the electron acceptors or by aerobic respiration at microoxic conditions. Thiosulfate is reduced partially to sulfide and sulfite. It is a first sulfur-reducing alkaliphilic haloarchaeon utilizing sugars, starch and glycerol as substrates for anaerobic growth. It is extremely halophilic (optimum at 3.5 M total Na<sup>+</sup>) and obligately alkaliphilic (optimum at pH 9.5). The dominant polar lipids include PG and PGP-Me with the archaeol (C<sub>20</sub>-C<sub>20</sub>) or extended archaeol (C<sub>20</sub>-C<sub>25</sub>) cores. The dominant respiratory lipoquinone is MK-8:8. On the basis of unique physiological properties and results of phylogenetic analysis, the soda lake isolate is suggested to be classified into a novel genus and species <em>Natranaeroarchaeum sulfidigenes</em> gen. nov., sp. nov. (=JCM 34033<sup>T</sup> = UNIQEM U1000<sup>T</sup>). Furthermore, on the bases of phylogenomic reconstruction, a new family <em>Natronoarchaeaceae</em> fam. nov. is proposed within the order <em>Halobacteriales</em> incorporating <em>Natranaeroarchaeum</em> and three related genera: <em>Natronoarchaeum</em>, <em>Salinarchaeum</em> and <em>Halostella</em>.</p></div>\",\"PeriodicalId\":3,\"journal\":{\"name\":\"ACS Applied Electronic Materials\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":4.3000,\"publicationDate\":\"2022-11-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S0723202022000637/pdfft?md5=98a965f95613b1fd801f0d883cf0a440&pid=1-s2.0-S0723202022000637-main.pdf\",\"citationCount\":\"5\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ACS Applied Electronic Materials\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0723202022000637\",\"RegionNum\":3,\"RegionCategory\":\"材料科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ENGINEERING, ELECTRICAL & ELECTRONIC\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Applied Electronic Materials","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0723202022000637","RegionNum":3,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ENGINEERING, ELECTRICAL & ELECTRONIC","Score":null,"Total":0}
引用次数: 5
摘要
从西伯利亚西南部的高盐湖中获得了一种纯培养的嗜碱盐古菌菌株AArc-ST,该菌株能够通过碳水化合物依赖的硫呼吸进行厌氧生长。系统发育分析表明,AArc-ST在盐杆菌目中形成了一个新的属水平分支,与Natronoarchaeum属关系最为密切。该菌株是兼性厌氧,具有严格的呼吸代谢,以单质硫和硫代硫酸盐作为电子受体进行厌氧呼吸或在微氧条件下进行好氧呼吸。硫代硫酸盐部分还原为硫化物和亚硫酸盐。它是第一种硫还原的嗜碱盐古菌,利用糖、淀粉和甘油作为厌氧生长的基质。它具有极强的亲盐性(在3.5 M总Na+时最适宜)和专性亲碱性(在pH 9.5时最适宜)。主要极性脂质包括PG和PGP-Me,具有古酚(C20-C20)或扩展古酚(C20-C25)核。主要的呼吸性脂醌是MK-8:8。根据其独特的生理特性和系统发育分析结果,建议将该钠湖分离菌归入新属、新种Natranaeroarchaeum sulfidigenes gen. nov., sp. nov (=JCM 34033T = UNIQEM U1000T)。此外,在系统基因组重建的基础上,发现了一个新的碱古菌科。11 .被认为属于盐细菌目,包括Natranaeroarchaeum和三个相关属:Natronoarchaeum, Salinarchaeum和Halostella。
Natranaeroarchaeum sulfidigenes gen. nov., sp. nov., carbohydrate-utilizing sulfur-respiring haloarchaeon from hypersaline soda lakes, a member of a new family Natronoarchaeaceae fam. nov. in the order Halobacteriales
A pure culture of alkaliphilic haloarchaeon strain AArc-ST capable of anaerobic growth by carbohydrate-dependent sulfur respiration was obtained from hypersaline lakes in southwestern Siberia. According to phylogenetic analysis, AArc-ST formed a new genus level branch most related to the genus Natronoarchaeum in the order Halobacteriales. The strain is facultatively anaerobic with strictly respiratory metabolism growing either by anaerobic respiration with elemental sulfur and thiosulfate as the electron acceptors or by aerobic respiration at microoxic conditions. Thiosulfate is reduced partially to sulfide and sulfite. It is a first sulfur-reducing alkaliphilic haloarchaeon utilizing sugars, starch and glycerol as substrates for anaerobic growth. It is extremely halophilic (optimum at 3.5 M total Na+) and obligately alkaliphilic (optimum at pH 9.5). The dominant polar lipids include PG and PGP-Me with the archaeol (C20-C20) or extended archaeol (C20-C25) cores. The dominant respiratory lipoquinone is MK-8:8. On the basis of unique physiological properties and results of phylogenetic analysis, the soda lake isolate is suggested to be classified into a novel genus and species Natranaeroarchaeum sulfidigenes gen. nov., sp. nov. (=JCM 34033T = UNIQEM U1000T). Furthermore, on the bases of phylogenomic reconstruction, a new family Natronoarchaeaceae fam. nov. is proposed within the order Halobacteriales incorporating Natranaeroarchaeum and three related genera: Natronoarchaeum, Salinarchaeum and Halostella.