桃李shaker -型K+通道基因的全基因组鉴定与特性分析类等。

IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
International Journal of Genomics Pub Date : 2022-03-09 eCollection Date: 2022-01-01 DOI:10.1155/2022/5053838
Yong Yang, Jinlong Han, Yue Zhang, Shizhuo Lin, Meixia Liang, Lizi Zhao, Zhizhong Song
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引用次数: 0

摘要

振子型K+通道对植物K+的获取和转运至关重要,在植物生长发育过程中起着关键作用。然而,对K+通道的分子机制在果树中极为罕见,尤其是在桃树中。本研究从桃源中鉴定出7个震荡型K+通道基因,这些基因不均匀分布在5条染色体上。桃树K+通道蛋白被划分为5个亚家族(I-V),在系统发育树上与梨同源物紧密聚集。在振子型K+通道基因的启动子区域检测到多种顺式调控元件,包括植物激素响应元件、非生物应激响应元件和发育调控元件。桃树K+通道基因在不同组织中表达存在差异,其中PpSPIK基因在桃树盛开花中特异性表达;PpKAT1和PpGORK主要在叶片中表达,PpAKT1、PpKC1和PpSKOR主要在根中表达。在K+缺乏条件下,非生物胁迫对桃摇K+通道基因的调控存在差异,ABA处理主要提高了摇K+通道基因在整个苗期的表达,而NaCl和PEG处理则降低了摇K+通道基因的表达,尤其是在根部。此外,电生理分析表明PpSKOR是桃子典型的电压依赖的向外整流K+通道。本研究为进一步研究桃摇床型K+通道基因的功能奠定了分子基础,为果树K+营养与平衡研究提供了理论基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Genome-Wide Identification and Characterization of the Shaker-Type K<sup>+</sup> Channel Genes in <i>Prunus persica</i> (L.) Batsch.

Genome-Wide Identification and Characterization of the Shaker-Type K<sup>+</sup> Channel Genes in <i>Prunus persica</i> (L.) Batsch.

Genome-Wide Identification and Characterization of the Shaker-Type K<sup>+</sup> Channel Genes in <i>Prunus persica</i> (L.) Batsch.

Genome-Wide Identification and Characterization of the Shaker-Type K+ Channel Genes in Prunus persica (L.) Batsch.

Shaker-type K+ channels are critical for plant K+ acquisition and translocation that play key roles during plant growth and development. However, molecular mechanisms towards K+ channels are extremely rare in fruit trees, especially in peach. In this study, we identified 7 putative shaker-type K+ channel genes from peach, which were unevenly distributed on 5 chromosomes. The peach shaker K+ channel proteins were classified into 5 subfamilies, I-V, and were tightly clustered with pear homologs in the phylogenetic tree. Various cis-acting regulatory elements were detected in the promoter region of the shaker-type K+ channel genes, including phytohormone-responsive, abiotic stress-responsive, and development regulatory elements. The peach shaker K+ channel genes were expressed differentially in distinct tissues, and PpSPIK was specifically expressed in the full-bloom flowers; PpKAT1 and PpGORK were predominantly expressed in the leaves, while PpAKT1, PpKC1, and PpSKOR were majorly expressed in the roots. The peach shaker K+ channel genes were differentially regulated by abiotic stresses in that K+ deficiency, and ABA treatment mainly increased the shaker K+ channel gene expression throughout the whole seedling, whereas NaCl and PEG treatment reduced the shaker K+ channel gene expression, especially in the roots. Moreover, electrophysiological analysis demonstrated that PpSKOR is a typical voltage-dependent outwardly rectifying K+ channel in peach. This study lays a molecular basis for further functional studies of the shaker-type K+ channel genes in peach and provides a theoretical foundation for K+ nutrition and balance research in fruit trees.

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来源期刊
International Journal of Genomics
International Journal of Genomics BIOCHEMISTRY & MOLECULAR BIOLOGY-BIOTECHNOLOGY & APPLIED MICROBIOLOGY
CiteScore
5.40
自引率
0.00%
发文量
33
审稿时长
17 weeks
期刊介绍: International Journal of Genomics is a peer-reviewed, Open Access journal that publishes research articles as well as review articles in all areas of genome-scale analysis. Topics covered by the journal include, but are not limited to: bioinformatics, clinical genomics, disease genomics, epigenomics, evolutionary genomics, functional genomics, genome engineering, and synthetic genomics.
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