癌细胞与正常细胞胞内空间的空间混沌与复杂性。

Q1 Mathematics
Tuan D Pham, Kazuhisa Ichikawa
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引用次数: 27

摘要

背景:生物图像分析中最具挑战性的问题之一是细胞内空间的动力学机制和复杂性的量化。本文研究了典型肿瘤细胞和正常细胞图像的潜在空间混沌和复杂行为,这些细胞图像的结构细节通过扫描电子显微镜和聚焦离子束系统的结合来揭示。这种数值量化对疾病的计算机建模和模拟具有重要意义。方法:采用聚焦离子束扫描电镜制备的人头颈部鳞状细胞癌(SCC-61)细胞株和正常小鼠胚胎成纤维细胞(MEF)细胞株进行实验研究。癌细胞和正常细胞的细胞器的空间分布可以根据空间细胞的方向,在图像空间的有界动力系统的近程和长程上进行分析。设计了计算最大李雅普诺夫指数的程序,该指数是细胞内图像中潜在混沌行为的一个指标。利用样本熵和规则维数来衡量细胞内图像的复杂度。结果:SCC-61细胞内空间的最大Lyapunov指数(LLEs)在不同的空间方向上均为正值,表明细胞的混沌行为。与SCC-61相比,MEF在长程分析中lle的正值较小,在短程分析中lle的值为零,表明MEF具有非混沌行为。发现SCC-61的细胞内空间比MEF更复杂。在细胞内空间的空间分布中,在对角线方向上测量的复杂性程度大约是在水平和垂直方向上测量的复杂性的两倍。结论:初步发现有望表征不同类型的细胞,因此对利用最先进的成像技术在空间领域研究癌细胞有用。对空间细胞的混沌行为和复杂性的测量将有助于计算生物学家深入了解细胞振荡模式和空间参数之间的联系,并为癌症治疗和新药发现模拟癌细胞信号网络提供合适的模型。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Spatial chaos and complexity in the intracellular space of cancer and normal cells.

Spatial chaos and complexity in the intracellular space of cancer and normal cells.

Spatial chaos and complexity in the intracellular space of cancer and normal cells.

Spatial chaos and complexity in the intracellular space of cancer and normal cells.

Background: One of the most challenging problems in biological image analysis is the quantification of the dynamical mechanism and complexity of the intracellular space. This paper investigates potential spatial chaos and complex behavior of the intracellular space of typical cancer and normal cell images whose structural details are revealed by the combination of scanning electron microscopy and focused ion beam systems. Such numerical quantifications have important implications for computer modeling and simulation of diseases.

Methods: Cancer cell lines derived from a human head and neck squamous cell carcinoma (SCC-61) and normal mouse embryonic fibroblast (MEF) cells produced by focused ion beam scanning electron microscopes were used in this study. Spatial distributions of the organelles of cancer and normal cells can be analyzed at both short range and long range of the bounded dynamical system of the image space, depending on the orientations of the spatial cell. A procedure was designed for calculating the largest Lyapunov exponent, which is an indicator of the potential chaotic behavior in intracellular images. Furthermore, the sample entropy and regularity dimension were applied to measure the complexity of the intracellular images.

Results: Positive values of the largest Lyapunov exponents (LLEs) of the intracellular space of the SCC-61 were obtained in different spatial orientations for both long-range and short-range models, suggesting the chaotic behavior of the cell. The MEF has smaller positive values of LLEs in the long range than those of the SCC-61, and zero vales of the LLEs in the short range analysis, suggesting a non-chaotic behavior. The intracellular space of the SCC-61 is found to be more complex than that of the MEF. The degree of complexity measured in the spatial distribution of the intracellular space in the diagonal direction was found to be approximately twice larger than the complexity measured in the horizontal and vertical directions.

Conclusion: Initial findings are promising for characterizing different types of cells and therefore useful for studying cancer cells in the spatial domain using state-of-the-art imaging technology. The measures of the chaotic behavior and complexity of the spatial cell will help computational biologists gain insights into identifying associations between the oscillation patterns and spatial parameters of cells, and appropriate model for simulating cancer cell signaling networks for cancer treatment and new drug discovery.

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来源期刊
Theoretical Biology and Medical Modelling
Theoretical Biology and Medical Modelling MATHEMATICAL & COMPUTATIONAL BIOLOGY-
自引率
0.00%
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0
审稿时长
6-12 weeks
期刊介绍: Theoretical Biology and Medical Modelling is an open access peer-reviewed journal adopting a broad definition of "biology" and focusing on theoretical ideas and models associated with developments in biology and medicine. Mathematicians, biologists and clinicians of various specialisms, philosophers and historians of science are all contributing to the emergence of novel concepts in an age of systems biology, bioinformatics and computer modelling. This is the field in which Theoretical Biology and Medical Modelling operates. We welcome submissions that are technically sound and offering either improved understanding in biology and medicine or progress in theory or method.
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