针对肥胖脂肪组织的候选基因和潜在治疗药物的生物信息学分析。

IF 3.5 4区 生物学 Q2 ENDOCRINOLOGY & METABOLISM
Yun Yu, Yu-Han Zhang, Liang Liu, Ling-Ling Yu, Jun-Pei Li, Jing-An Rao, Feng Hu, Ling-Juan Zhu, Hui-Hui Bao, Xiao-Shu Cheng
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引用次数: 4

摘要

肥胖是一种复杂的疾病,会影响身体的多个器官。然而,肥胖的潜在机制及其治疗方法在很大程度上尚未被探索。这项研究的重点是利用生物信息学来发现肥胖可能的治疗靶点。首先,使用GSE133099数据库鉴定364个差异表达基因(deg)。然后,对deg进行组织特异性分析和富集分析,随后创建蛋白质-蛋白质相互作用(PPI)网络并生成药物-基因相互作用数据库,以筛选关键基因和潜在的未来针对肥胖的药物。结果表明,神经系统标志物的组织特异性表达差异显著(34.7%,52/150)。其中,Lep、ApoE、Fyn和FN1是肥胖患者脂肪细胞样本中相对于对照组观察到的关键基因。此外,还筛选了针对关键基因的9种潜在治疗药物(达沙替尼、奥克里帕敏、利培酮、吉非齐齐、利托那韦、氟伐他汀、普伐他汀、华法林、阿托伐他汀)。结论发现的关键基因(Lep、ApoE、Fyn、FN1)及9种候选药物可作为治疗肥胖症的靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Bioinformatics analysis of candidate genes and potential therapeutic drugs targeting adipose tissue in obesity.

Bioinformatics analysis of candidate genes and potential therapeutic drugs targeting adipose tissue in obesity.

Bioinformatics analysis of candidate genes and potential therapeutic drugs targeting adipose tissue in obesity.

Bioinformatics analysis of candidate genes and potential therapeutic drugs targeting adipose tissue in obesity.

Obesity is a complex medical condition that affects multiple organs in the body. However, the underlying mechanisms of obesity, as well as its treatment, are largely unexplored. The focus of this research was to use bioinformatics to discover possible treatment targets for obesity. To begin, the GSE133099 database was used to identify 364 differentially expressed genes (DEGs). Then, DEGs were subjected to tissue-specific analyses and enrichment analyses, followed by the creation of a protein-protein interaction (PPI) network and generation of a drug-gene interaction database to screen key genes and potential future drugs targeting obesity. Findings have illustrated that the tissue-specific expression of neurologic markers varied significantly (34.7%, 52/150). Among these genes, Lep, ApoE, Fyn, and FN1 were the key genes observed in the adipocyte samples from obese patients relative to the controls. Furthermore, nine potential therapeutic drugs (dasatinib, ocriplasmin, risperidone, gemfibrozil, ritonavir, fluvastatin, pravastatin, warfarin, atorvastatin) that target the key genes were also screened and selected. To conclude the key genes discovered (Lep, ApoE, Fyn, and FN1), as well as 9 candidate drugs, could be used as therapeutic targets in treating obesity.

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来源期刊
Adipocyte
Adipocyte Medicine-Histology
CiteScore
6.50
自引率
3.00%
发文量
46
审稿时长
32 weeks
期刊介绍: Adipocyte recognizes that the adipose tissue is the largest endocrine organ in the body, and explores the link between dysfunctional adipose tissue and the growing number of chronic diseases including diabetes, hypertension, cardiovascular disease and cancer. Historically, the primary function of the adipose tissue was limited to energy storage and thermoregulation. However, a plethora of research over the past 3 decades has recognized the dynamic role of the adipose tissue and its contribution to a variety of physiological processes including reproduction, angiogenesis, apoptosis, inflammation, blood pressure, coagulation, fibrinolysis, immunity and general metabolic homeostasis. The field of Adipose Tissue research has grown tremendously, and Adipocyte is the first international peer-reviewed journal of its kind providing a multi-disciplinary forum for research focusing exclusively on all aspects of adipose tissue physiology and pathophysiology. Adipocyte accepts high-profile submissions in basic, translational and clinical research.
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