柑橘黑腐病和褐斑病摩洛哥分离株的遗传多样性和群体结构。

Lamyaa Zelmat, Joseph Mbasani Mansi, Sarra Aouzal, Fatima Gaboun, Slimane Khayi, Mohammed Ibriz, Mohammed El Guilli, Rachid Mentag
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引用次数: 0

摘要

Alternaria alternata是世界范围内引起柑橘多种疾病的重要真菌之一。在摩洛哥,链格孢黑腐病(ABR)和链格孢褐色斑点病(ABS)是造成柑橘商业品种严重损失的两种主要病害。本研究的目的是研究该菌株的遗传多样性和种群结构。链格孢菌是从摩洛哥七个省不同地点(市场、包装厂和果园)采集的受感染柑橘类水果中获得的。用序列相关扩增多态性(SRAP)标记对45个分离株进行分析,并用UPGMA法和Jaccard系数对DNA片段进行聚类分析。聚类分析显示,分离物分为四个不同的组。AMOVA还揭示了教派内部的很大程度的差异。链格孢分离株(99%)。结果表明,这些分离株的SRAP模式、宿主和地理来源之间没有相关性。种群结构分析表明,来自同一采集来源的链格孢分离株具有几乎相似的混合水平。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Genetic Diversity and Population Structure of Moroccan Isolates Belong to Alternaria spp. Causing Black Rot and Brown Spot in Citrus

Genetic Diversity and Population Structure of Moroccan Isolates Belong to Alternaria spp. Causing Black Rot and Brown Spot in Citrus

Alternaria alternata is one of the most important fungi causing various diseases on citrus worldwide. In Morocco, Alternaria black rot (ABR) and Alternaria brown spot (ABS) are two major diseases causing serious losses in commercial cultivars of citrus. The aim of the present work was to study the genetic diversity and the population structure of isolates belonging to sect. Alternaria obtained from infected citrus fruits, collected from seven provinces at different locations in Morocco (markets, packinghouses, and orchards). Forty-five isolates were analyzed by sequence-related amplified polymorphism (SRAP) markers, and cluster analysis of DNA fragments was performed using UPGMA method and Jaccard coefficient. Cluster analysis revealed that isolates were classified in four distinct groups. AMOVA revealed also a large extent of variation within sect. Alternaria isolates (99%). The results demonstrate that no correlation was found among SRAP pattern, host, and geographical origin of these isolates. Population structure analyses showed that the Alternaria isolates from the same collection origin had almost a similar level of admixture.

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Comparative and Functional Genomics
Comparative and Functional Genomics 生物-生化与分子生物学
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