{"title":"脊椎动物的组成是蜱传病原体流行的一个指标吗?","authors":"Agustín Estrada-Peña, Natalia Fernández-Ruiz","doi":"10.1080/20008686.2022.2025647","DOIUrl":null,"url":null,"abstract":"<p><p>Communities of vertebrates tend to appear together under similar ranges of environmental features. This study explores whether an explicit combination of vertebrates and their contact rates with a tick vector might constitute an indicator of the prevalence of a pathogen in the quest for ticks at the western Palearctic scale. We asked how 'indicator' communities could be 'markers' of the actual infection rates of the tick in the field of two species of <i>Borrelia</i> (a bacterium transmitted by the tick <i>Ixodes ricinus)</i>. We approached an unsupervised classification of the territory to obtain clusters on the grounds of abundance of each vertebrate and contact rates with the tick. Statistical models based on Neural Networks, Random Forest, Gradient Boosting, and AdaBoost were detect the best correlation between communities' composition and the prevalence of <i>Borrelia afzelii</i> and <i>Borrelia gariniii</i> in questing ticks. Both Gradient Boosting and AdaBoost produced the best results, predicting tick infection rates from the indicator communities. A ranking algorithm demonstrated that the prevalence of these bacteria in the tick is correlated with indicator communities of vertebrates on sites selected as a proof-of-concept. We acknowledge that our findings are supported by statistical outcomes, but they provide consistency for a framework that should be deeper explored at the large scale.</p>","PeriodicalId":37446,"journal":{"name":"Infection Ecology and Epidemiology","volume":"12 1","pages":"2025647"},"PeriodicalIF":0.0000,"publicationDate":"2022-01-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8757609/pdf/","citationCount":"2","resultStr":"{\"title\":\"Is composition of vertebrates an indicator of the prevalence of tick-borne pathogens?\",\"authors\":\"Agustín Estrada-Peña, Natalia Fernández-Ruiz\",\"doi\":\"10.1080/20008686.2022.2025647\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Communities of vertebrates tend to appear together under similar ranges of environmental features. This study explores whether an explicit combination of vertebrates and their contact rates with a tick vector might constitute an indicator of the prevalence of a pathogen in the quest for ticks at the western Palearctic scale. We asked how 'indicator' communities could be 'markers' of the actual infection rates of the tick in the field of two species of <i>Borrelia</i> (a bacterium transmitted by the tick <i>Ixodes ricinus)</i>. We approached an unsupervised classification of the territory to obtain clusters on the grounds of abundance of each vertebrate and contact rates with the tick. Statistical models based on Neural Networks, Random Forest, Gradient Boosting, and AdaBoost were detect the best correlation between communities' composition and the prevalence of <i>Borrelia afzelii</i> and <i>Borrelia gariniii</i> in questing ticks. Both Gradient Boosting and AdaBoost produced the best results, predicting tick infection rates from the indicator communities. A ranking algorithm demonstrated that the prevalence of these bacteria in the tick is correlated with indicator communities of vertebrates on sites selected as a proof-of-concept. We acknowledge that our findings are supported by statistical outcomes, but they provide consistency for a framework that should be deeper explored at the large scale.</p>\",\"PeriodicalId\":37446,\"journal\":{\"name\":\"Infection Ecology and Epidemiology\",\"volume\":\"12 1\",\"pages\":\"2025647\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2022-01-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8757609/pdf/\",\"citationCount\":\"2\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Infection Ecology and Epidemiology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1080/20008686.2022.2025647\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2022/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q1\",\"JCRName\":\"Environmental Science\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Infection Ecology and Epidemiology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1080/20008686.2022.2025647","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2022/1/1 0:00:00","PubModel":"eCollection","JCR":"Q1","JCRName":"Environmental Science","Score":null,"Total":0}
Is composition of vertebrates an indicator of the prevalence of tick-borne pathogens?
Communities of vertebrates tend to appear together under similar ranges of environmental features. This study explores whether an explicit combination of vertebrates and their contact rates with a tick vector might constitute an indicator of the prevalence of a pathogen in the quest for ticks at the western Palearctic scale. We asked how 'indicator' communities could be 'markers' of the actual infection rates of the tick in the field of two species of Borrelia (a bacterium transmitted by the tick Ixodes ricinus). We approached an unsupervised classification of the territory to obtain clusters on the grounds of abundance of each vertebrate and contact rates with the tick. Statistical models based on Neural Networks, Random Forest, Gradient Boosting, and AdaBoost were detect the best correlation between communities' composition and the prevalence of Borrelia afzelii and Borrelia gariniii in questing ticks. Both Gradient Boosting and AdaBoost produced the best results, predicting tick infection rates from the indicator communities. A ranking algorithm demonstrated that the prevalence of these bacteria in the tick is correlated with indicator communities of vertebrates on sites selected as a proof-of-concept. We acknowledge that our findings are supported by statistical outcomes, but they provide consistency for a framework that should be deeper explored at the large scale.
期刊介绍:
Infection Ecology & Epidemiology aims to stimulate inter-disciplinary collaborations dealing with a range of subjects, from the plethora of zoonotic infections in humans, over diseases with implication in wildlife ecology, to advanced virology and bacteriology. The journal specifically welcomes papers from studies where researchers from multiple medical and ecological disciplines are collaborating so as to increase our knowledge of the emergence, spread and effect of new and re-emerged infectious diseases in humans, domestic animals and wildlife. Main areas of interest include, but are not limited to: 1.Zoonotic microbioorganisms 2.Vector borne infections 3.Gastrointestinal pathogens 4.Antimicrobial resistance 5.Zoonotic microbioorganisms in changing environment