脊椎动物的组成是蜱传病原体流行的一个指标吗?

Q1 Environmental Science
Infection Ecology and Epidemiology Pub Date : 2022-01-10 eCollection Date: 2022-01-01 DOI:10.1080/20008686.2022.2025647
Agustín Estrada-Peña, Natalia Fernández-Ruiz
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引用次数: 2

摘要

脊椎动物群落倾向于在相似的环境特征范围内出现在一起。本研究探讨了是否脊椎动物及其与蜱虫媒介的接触率的明确组合可能构成在古北西洋尺度上寻找蜱虫的病原体流行率的指标。我们询问了“指标”群落如何能够成为两种疏螺旋体(一种由蜱虫传播的细菌)在野外的实际感染率的“标记”。我们采用无监督分类方法,根据每种脊椎动物的丰度和与蜱虫的接触率对领地进行分类。基于神经网络、随机森林、梯度增强和AdaBoost的统计模型检测出种群组成与蜱类中阿氏疏螺旋体和加里氏疏螺旋体流行率之间的最佳相关性。Gradient Boosting和AdaBoost在预测指标社区的蜱虫感染率方面都取得了最好的结果。排序算法表明,蜱虫中这些细菌的流行与选定地点的脊椎动物指标群落相关,作为概念验证。我们承认,我们的发现得到了统计结果的支持,但它们为一个框架提供了一致性,应该在更大的范围内进行更深入的探索。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Is composition of vertebrates an indicator of the prevalence of tick-borne pathogens?

Is composition of vertebrates an indicator of the prevalence of tick-borne pathogens?

Is composition of vertebrates an indicator of the prevalence of tick-borne pathogens?

Is composition of vertebrates an indicator of the prevalence of tick-borne pathogens?

Communities of vertebrates tend to appear together under similar ranges of environmental features. This study explores whether an explicit combination of vertebrates and their contact rates with a tick vector might constitute an indicator of the prevalence of a pathogen in the quest for ticks at the western Palearctic scale. We asked how 'indicator' communities could be 'markers' of the actual infection rates of the tick in the field of two species of Borrelia (a bacterium transmitted by the tick Ixodes ricinus). We approached an unsupervised classification of the territory to obtain clusters on the grounds of abundance of each vertebrate and contact rates with the tick. Statistical models based on Neural Networks, Random Forest, Gradient Boosting, and AdaBoost were detect the best correlation between communities' composition and the prevalence of Borrelia afzelii and Borrelia gariniii in questing ticks. Both Gradient Boosting and AdaBoost produced the best results, predicting tick infection rates from the indicator communities. A ranking algorithm demonstrated that the prevalence of these bacteria in the tick is correlated with indicator communities of vertebrates on sites selected as a proof-of-concept. We acknowledge that our findings are supported by statistical outcomes, but they provide consistency for a framework that should be deeper explored at the large scale.

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来源期刊
Infection Ecology and Epidemiology
Infection Ecology and Epidemiology Environmental Science-Environmental Science (miscellaneous)
CiteScore
8.70
自引率
0.00%
发文量
4
审稿时长
12 weeks
期刊介绍: Infection Ecology & Epidemiology aims to stimulate inter-disciplinary collaborations dealing with a range of subjects, from the plethora of zoonotic infections in humans, over diseases with implication in wildlife ecology, to advanced virology and bacteriology. The journal specifically welcomes papers from studies where researchers from multiple medical and ecological disciplines are collaborating so as to increase our knowledge of the emergence, spread and effect of new and re-emerged infectious diseases in humans, domestic animals and wildlife. Main areas of interest include, but are not limited to: 1.Zoonotic microbioorganisms 2.Vector borne infections 3.Gastrointestinal pathogens 4.Antimicrobial resistance 5.Zoonotic microbioorganisms in changing environment
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