公民科学项目揭示了从城市土壤中发现的新型镰刀菌(镰刀菌科,sordariomyetes)。

Fungal systematics and evolution Pub Date : 2021-12-01 Epub Date: 2021-10-12 DOI:10.3114/fuse.2021.08.09
P W Crous, M Hernández-Restrepo, A L van Iperen, M Starink-Willemse, M Sandoval-Denis, J Z Groenewald
{"title":"公民科学项目揭示了从城市土壤中发现的新型镰刀菌(镰刀菌科,sordariomyetes)。","authors":"P W Crous,&nbsp;M Hernández-Restrepo,&nbsp;A L van Iperen,&nbsp;M Starink-Willemse,&nbsp;M Sandoval-Denis,&nbsp;J Z Groenewald","doi":"10.3114/fuse.2021.08.09","DOIUrl":null,"url":null,"abstract":"Soil fungi play a crucial role in soil quality and fertility in being able to break down organic matter but are frequently also observed to play a role as important plant pathogens. As part of a Citizen Science Project initiated by the Westerdijk Fungal Biodiversity Institute and the Utrecht University Museum, which aimed to describe novel fungal species from Dutch garden soil, the diversity of fusarioid fungi (Fusarium and other fusarioid genera), which are members of Nectriaceae (Hypocreales) was investigated. Preliminary analyses of ITS and LSU sequences from more than 4 750 isolates obtained indicated that 109 strains belong to this generic complex. Based on multi-locus phylogenies of combinations of cmdA, tef1, rpb1, rpb2 and tub2 alignments, and morphological characteristics, 25 species were identified, namely 22 in Fusarium and three in Neocosmospora. Furthermore, two species were described as new namely F. vanleeuwenii from the Fusarium oxysporum species complex (FOSC), and F. wereldwijsianum from the Fusarium incarnatum-equiseti species complex (FIESC). Other species encountered in this study include in the FOSC: F. curvatum, F. nirenbergiae, F. oxysporum and three undescribed Fusarium spp.; in the FIESC: F. clavus, F. croceum, F. equiseti, F. flagelliforme and F. toxicum; Fusarium tricinctum species complex: F. flocciferum and F. torulosum; the Fusarium sambucinum species complex: F. culmorum and F. graminearum; the Fusarium redolens species complex: F. redolens; and the Fusarium fujikuroi species complex: F. verticillioides. Three species of Neocosmospora were encountered, namely N. solani, N. stercicola and N. tonkinensis. Although soil fungal diversity has been well studied in the Netherlands, this study revealed two new species, and eight new records: F. clavus, F. croceum, F. flagelliforme, F. odoratissimum, F. tardicrescens, F. toxicum, F. triseptatum and N. stercicola.","PeriodicalId":73121,"journal":{"name":"Fungal systematics and evolution","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8687230/pdf/","citationCount":"4","resultStr":"{\"title\":\"Citizen science project reveals novel fusarioid fungi (<i>Nectriaceae, Sordariomycetes</i>) from urban soils.\",\"authors\":\"P W Crous,&nbsp;M Hernández-Restrepo,&nbsp;A L van Iperen,&nbsp;M Starink-Willemse,&nbsp;M Sandoval-Denis,&nbsp;J Z Groenewald\",\"doi\":\"10.3114/fuse.2021.08.09\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Soil fungi play a crucial role in soil quality and fertility in being able to break down organic matter but are frequently also observed to play a role as important plant pathogens. As part of a Citizen Science Project initiated by the Westerdijk Fungal Biodiversity Institute and the Utrecht University Museum, which aimed to describe novel fungal species from Dutch garden soil, the diversity of fusarioid fungi (Fusarium and other fusarioid genera), which are members of Nectriaceae (Hypocreales) was investigated. Preliminary analyses of ITS and LSU sequences from more than 4 750 isolates obtained indicated that 109 strains belong to this generic complex. Based on multi-locus phylogenies of combinations of cmdA, tef1, rpb1, rpb2 and tub2 alignments, and morphological characteristics, 25 species were identified, namely 22 in Fusarium and three in Neocosmospora. Furthermore, two species were described as new namely F. vanleeuwenii from the Fusarium oxysporum species complex (FOSC), and F. wereldwijsianum from the Fusarium incarnatum-equiseti species complex (FIESC). Other species encountered in this study include in the FOSC: F. curvatum, F. nirenbergiae, F. oxysporum and three undescribed Fusarium spp.; in the FIESC: F. clavus, F. croceum, F. equiseti, F. flagelliforme and F. toxicum; Fusarium tricinctum species complex: F. flocciferum and F. torulosum; the Fusarium sambucinum species complex: F. culmorum and F. graminearum; the Fusarium redolens species complex: F. redolens; and the Fusarium fujikuroi species complex: F. verticillioides. Three species of Neocosmospora were encountered, namely N. solani, N. stercicola and N. tonkinensis. Although soil fungal diversity has been well studied in the Netherlands, this study revealed two new species, and eight new records: F. clavus, F. croceum, F. flagelliforme, F. odoratissimum, F. tardicrescens, F. toxicum, F. triseptatum and N. stercicola.\",\"PeriodicalId\":73121,\"journal\":{\"name\":\"Fungal systematics and evolution\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2021-12-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8687230/pdf/\",\"citationCount\":\"4\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Fungal systematics and evolution\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.3114/fuse.2021.08.09\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2021/10/12 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Fungal systematics and evolution","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3114/fuse.2021.08.09","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2021/10/12 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 4

摘要

土壤真菌在土壤质量和肥力中起着至关重要的作用,因为它们能够分解有机物,但也经常被观察到作为重要的植物病原体发挥作用。作为Westerdijk真菌生物多样性研究所和乌得勒支大学博物馆发起的公民科学项目的一部分,该项目旨在描述来自荷兰花园土壤的新型真菌物种,对镰刀菌属真菌(镰刀菌和其他镰刀菌属)的多样性进行了调查。镰刀菌属是Nectriaceae (Hypocreales)的成员。对4 750多株分离株的ITS和LSU序列进行初步分析,发现109株属于该属复合体。根据cmdA、tef1、rpb1、rpb2和tub2组合的多位点系统发育和形态特征,共鉴定出25种,其中镰刀菌22种,新宇宙孢子菌3种。另外,从尖孢镰刀菌种复合体(Fusarium oxysporum species complex, FOSC)中分离出2个新物种,分别为凡列文氏镰刀菌(F. vanleeuwenii)和从incarnatum-equiseti种复合体(FIESC)中分离出F. wereldwijsianum。本研究中发现的其他物种包括:F. curvatum, F. nirenbergiae, F. oxysporum和3种未描述的Fusarium spp.;在FIESC中:F. clavus、F. croceum、F. equiseti、F. flagelliforme和F. toxicum;三角镰刀菌种群:絮状镰刀菌和环形镰刀菌;sambucinum镰刀菌种群:镰刀菌和镰刀菌;红镰刀菌种群:红镰刀菌;和Fusarium fujikuroi物种复合体:F. verticillioides。共发现新宇宙孢子虫3种,分别为solani N.、stercicola N.和tonkinensis N.。虽然荷兰的土壤真菌多样性已经得到了很好的研究,但本次研究发现了2个新种和8个新记录:F. clavus、F. croceum、F. flagelliforme、F. odoratissimum、F. tardicrescens、F. toxicum、F. triseptatum和N. stercicola。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Citizen science project reveals novel fusarioid fungi (Nectriaceae, Sordariomycetes) from urban soils.
Soil fungi play a crucial role in soil quality and fertility in being able to break down organic matter but are frequently also observed to play a role as important plant pathogens. As part of a Citizen Science Project initiated by the Westerdijk Fungal Biodiversity Institute and the Utrecht University Museum, which aimed to describe novel fungal species from Dutch garden soil, the diversity of fusarioid fungi (Fusarium and other fusarioid genera), which are members of Nectriaceae (Hypocreales) was investigated. Preliminary analyses of ITS and LSU sequences from more than 4 750 isolates obtained indicated that 109 strains belong to this generic complex. Based on multi-locus phylogenies of combinations of cmdA, tef1, rpb1, rpb2 and tub2 alignments, and morphological characteristics, 25 species were identified, namely 22 in Fusarium and three in Neocosmospora. Furthermore, two species were described as new namely F. vanleeuwenii from the Fusarium oxysporum species complex (FOSC), and F. wereldwijsianum from the Fusarium incarnatum-equiseti species complex (FIESC). Other species encountered in this study include in the FOSC: F. curvatum, F. nirenbergiae, F. oxysporum and three undescribed Fusarium spp.; in the FIESC: F. clavus, F. croceum, F. equiseti, F. flagelliforme and F. toxicum; Fusarium tricinctum species complex: F. flocciferum and F. torulosum; the Fusarium sambucinum species complex: F. culmorum and F. graminearum; the Fusarium redolens species complex: F. redolens; and the Fusarium fujikuroi species complex: F. verticillioides. Three species of Neocosmospora were encountered, namely N. solani, N. stercicola and N. tonkinensis. Although soil fungal diversity has been well studied in the Netherlands, this study revealed two new species, and eight new records: F. clavus, F. croceum, F. flagelliforme, F. odoratissimum, F. tardicrescens, F. toxicum, F. triseptatum and N. stercicola.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
7.30
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信