{"title":"[病毒-宿主共同进化:内源性RNA病毒元件作为假基因]。","authors":"Keizo Tomonaga","doi":"10.2222/jsv.70.49","DOIUrl":null,"url":null,"abstract":"<p><p>RNA viruses do not need to take the form of DNAs, and RNAs alone complete their replication cycles. On the other hand, since the 1970s, it has been known that DNA fragments derived from RNA viruses can be detected in RNA virus-infected cells. Furthermore, in this decade, it has become clear that the eukaryotic genomes contain genetic sequences derived from non-retroviral RNA viruses. The DNA sequences derived from these RNA viruses are thought to be generatedby using a transposable mechanism of retrotransposon, such as LINE-1. Many endogenous RNA viral sequences are formed by the same mechanism as processed pseudogenes in eukaryotic cells, but the significance of the production of RNA viral \"pseudogenes \" in infected cells has not been elucidated. We have discovered endogenous bornavirus-like elements (EBLs), which derived from a negative-sense, single-stranded RNA virus, Bornaviruses, and have studied the evolution and function of EBLs in host animals. The analysis of EBLs provides us a clue to unravel the history of host-RNA virus coexistence. In this review, I overview about the function of endogenous RNA virus sequences, especially EBLs in mammalian genomes, and discuss the significance of endogenization of RNA viruses as viral pseudogenes in evolution.</p>","PeriodicalId":75275,"journal":{"name":"Uirusu","volume":"70 1","pages":"49-56"},"PeriodicalIF":0.0000,"publicationDate":"2020-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"[Virus-host coevolution: Endogenous RNA viral elements as pseudogenes].\",\"authors\":\"Keizo Tomonaga\",\"doi\":\"10.2222/jsv.70.49\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>RNA viruses do not need to take the form of DNAs, and RNAs alone complete their replication cycles. On the other hand, since the 1970s, it has been known that DNA fragments derived from RNA viruses can be detected in RNA virus-infected cells. Furthermore, in this decade, it has become clear that the eukaryotic genomes contain genetic sequences derived from non-retroviral RNA viruses. The DNA sequences derived from these RNA viruses are thought to be generatedby using a transposable mechanism of retrotransposon, such as LINE-1. Many endogenous RNA viral sequences are formed by the same mechanism as processed pseudogenes in eukaryotic cells, but the significance of the production of RNA viral \\\"pseudogenes \\\" in infected cells has not been elucidated. We have discovered endogenous bornavirus-like elements (EBLs), which derived from a negative-sense, single-stranded RNA virus, Bornaviruses, and have studied the evolution and function of EBLs in host animals. The analysis of EBLs provides us a clue to unravel the history of host-RNA virus coexistence. In this review, I overview about the function of endogenous RNA virus sequences, especially EBLs in mammalian genomes, and discuss the significance of endogenization of RNA viruses as viral pseudogenes in evolution.</p>\",\"PeriodicalId\":75275,\"journal\":{\"name\":\"Uirusu\",\"volume\":\"70 1\",\"pages\":\"49-56\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2020-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Uirusu\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.2222/jsv.70.49\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Uirusu","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.2222/jsv.70.49","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
RNA病毒不需要采用dna的形式,RNA本身就完成了它们的复制周期。另一方面,自20世纪70年代以来,人们已经知道,从RNA病毒中提取的DNA片段可以在RNA病毒感染的细胞中检测到。此外,在这十年中,人们已经清楚地认识到真核生物基因组包含来自非逆转录病毒RNA病毒的基因序列。来自这些RNA病毒的DNA序列被认为是通过逆转录转座子的转座机制产生的,例如LINE-1。许多内源性RNA病毒序列的形成机制与真核细胞中加工的假基因相同,但在感染细胞中产生RNA病毒“假基因”的意义尚未阐明。我们发现了内源性bornavvirus -like elements (EBLs),它来源于一种负义单链RNA病毒bornavvirus,并研究了EBLs在宿主动物中的进化和功能。EBLs的分析为我们揭示宿主- rna病毒共存的历史提供了线索。本文综述了内源性RNA病毒序列,特别是EBLs在哺乳动物基因组中的功能,并讨论了RNA病毒作为病毒假基因的内源性在进化中的意义。
[Virus-host coevolution: Endogenous RNA viral elements as pseudogenes].
RNA viruses do not need to take the form of DNAs, and RNAs alone complete their replication cycles. On the other hand, since the 1970s, it has been known that DNA fragments derived from RNA viruses can be detected in RNA virus-infected cells. Furthermore, in this decade, it has become clear that the eukaryotic genomes contain genetic sequences derived from non-retroviral RNA viruses. The DNA sequences derived from these RNA viruses are thought to be generatedby using a transposable mechanism of retrotransposon, such as LINE-1. Many endogenous RNA viral sequences are formed by the same mechanism as processed pseudogenes in eukaryotic cells, but the significance of the production of RNA viral "pseudogenes " in infected cells has not been elucidated. We have discovered endogenous bornavirus-like elements (EBLs), which derived from a negative-sense, single-stranded RNA virus, Bornaviruses, and have studied the evolution and function of EBLs in host animals. The analysis of EBLs provides us a clue to unravel the history of host-RNA virus coexistence. In this review, I overview about the function of endogenous RNA virus sequences, especially EBLs in mammalian genomes, and discuss the significance of endogenization of RNA viruses as viral pseudogenes in evolution.