球藻科球藻菌的系统发育与种界,以亚洲种为重点。

IF 9.5 1区 生物学 Q1 MYCOLOGY
Persoonia Pub Date : 2020-06-01 Epub Date: 2019-12-16 DOI:10.3767/persoonia.2020.44.05
L H Han, G Wu, E Horak, R E Halling, J Xu, E S T Ndolo, H Sato, N Fechner, Y P Sharma, Z L Yang
{"title":"球藻科球藻菌的系统发育与种界,以亚洲种为重点。","authors":"L H Han,&nbsp;G Wu,&nbsp;E Horak,&nbsp;R E Halling,&nbsp;J Xu,&nbsp;E S T Ndolo,&nbsp;H Sato,&nbsp;N Fechner,&nbsp;Y P Sharma,&nbsp;Z L Yang","doi":"10.3767/persoonia.2020.44.05","DOIUrl":null,"url":null,"abstract":"<p><p><i>Strobilomyces</i> is broadly distributed geographically and serves an important ecological function. However, it has been difficult to delimit species within the genus, primarily due to developmental variations and phenotypic plasticity. To elucidate phylogenetic relationships among species within the genus and to understand its species diversity, especially in Asia, materials of the genus collected from five continents (Africa, Asia, Australia, Europe, and North/Central America) were investigated. The phylogeny of <i>Strobilomyces</i> was reconstructed based on nucleotide sequences of four genes coding for: the largest and the second largest subunits of the RNA polymerase II (<i>RPB</i>1 and <i>RPB</i>2); the translation elongation factor subunit 1-α (<i>TEF</i>1); and the mitochondrial cytochrome oxidase subunit 3 (<i>COX</i>3). The combined results based on molecular phylogenetics, morphological characters, host tree associations, and geographical distribution patterns support a new classification consisting of two sections, sect. <i>Strobilomyces</i> and sect. <i>Echinati</i>. Using the genealogical concordance phylogenetic species recognition (GCPSR) approach, at least 33 phylogenetic species in Asia can be delimited, all of which are supported by morphological features, and five phylogenetic species remain to be described. The mountainous region of Southwest China is especially special, containing at least 21 species and likely represents a centre of diversification. We further compared our specimens with the type specimens of 25 species of <i>Strobilomyces</i>. Our comparisons suggest that, there are a total of 31 distinct species, while <i>S. sanmingensis, S. verruculosus</i>, <i>S. subnigricans</i>, and <i>S. zangii</i>/<i>S. areolatus</i>, are synonyms of <i>S. mirandus</i>, <i>S. giganteus</i>, <i>S. alpinus</i> and <i>S. seminudus</i>, respectively. Eight new species, namely, <i>S. albidus</i>, <i>S. anthracinus</i>, <i>S. calidus</i>, <i>S. cingulatus</i>, <i>S. densisquamosus</i>, <i>S. douformis</i>, <i>S. microreticulatus</i> and <i>S. pinophilus</i>, are described. A dichotomous key to the Asian <i>Strobilomyces</i> species is provided.</p>","PeriodicalId":20014,"journal":{"name":"Persoonia","volume":"44 ","pages":"113-139"},"PeriodicalIF":9.5000,"publicationDate":"2020-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.3767/persoonia.2020.44.05","citationCount":"11","resultStr":"{\"title\":\"Phylogeny and species delimitation of <i>Strobilomyces</i> (<i>Boletaceae</i>), with an emphasis on the Asian species.\",\"authors\":\"L H Han,&nbsp;G Wu,&nbsp;E Horak,&nbsp;R E Halling,&nbsp;J Xu,&nbsp;E S T Ndolo,&nbsp;H Sato,&nbsp;N Fechner,&nbsp;Y P Sharma,&nbsp;Z L Yang\",\"doi\":\"10.3767/persoonia.2020.44.05\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><i>Strobilomyces</i> is broadly distributed geographically and serves an important ecological function. However, it has been difficult to delimit species within the genus, primarily due to developmental variations and phenotypic plasticity. To elucidate phylogenetic relationships among species within the genus and to understand its species diversity, especially in Asia, materials of the genus collected from five continents (Africa, Asia, Australia, Europe, and North/Central America) were investigated. The phylogeny of <i>Strobilomyces</i> was reconstructed based on nucleotide sequences of four genes coding for: the largest and the second largest subunits of the RNA polymerase II (<i>RPB</i>1 and <i>RPB</i>2); the translation elongation factor subunit 1-α (<i>TEF</i>1); and the mitochondrial cytochrome oxidase subunit 3 (<i>COX</i>3). The combined results based on molecular phylogenetics, morphological characters, host tree associations, and geographical distribution patterns support a new classification consisting of two sections, sect. <i>Strobilomyces</i> and sect. <i>Echinati</i>. Using the genealogical concordance phylogenetic species recognition (GCPSR) approach, at least 33 phylogenetic species in Asia can be delimited, all of which are supported by morphological features, and five phylogenetic species remain to be described. The mountainous region of Southwest China is especially special, containing at least 21 species and likely represents a centre of diversification. We further compared our specimens with the type specimens of 25 species of <i>Strobilomyces</i>. Our comparisons suggest that, there are a total of 31 distinct species, while <i>S. sanmingensis, S. verruculosus</i>, <i>S. subnigricans</i>, and <i>S. zangii</i>/<i>S. areolatus</i>, are synonyms of <i>S. mirandus</i>, <i>S. giganteus</i>, <i>S. alpinus</i> and <i>S. seminudus</i>, respectively. Eight new species, namely, <i>S. albidus</i>, <i>S. anthracinus</i>, <i>S. calidus</i>, <i>S. cingulatus</i>, <i>S. densisquamosus</i>, <i>S. douformis</i>, <i>S. microreticulatus</i> and <i>S. pinophilus</i>, are described. A dichotomous key to the Asian <i>Strobilomyces</i> species is provided.</p>\",\"PeriodicalId\":20014,\"journal\":{\"name\":\"Persoonia\",\"volume\":\"44 \",\"pages\":\"113-139\"},\"PeriodicalIF\":9.5000,\"publicationDate\":\"2020-06-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.3767/persoonia.2020.44.05\",\"citationCount\":\"11\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Persoonia\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.3767/persoonia.2020.44.05\",\"RegionNum\":1,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2019/12/16 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q1\",\"JCRName\":\"MYCOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Persoonia","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3767/persoonia.2020.44.05","RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2019/12/16 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"MYCOLOGY","Score":null,"Total":0}
引用次数: 11

摘要

联芽菌在地理上分布广泛,具有重要的生态功能。然而,由于发育变异和表型可塑性,很难在属内划分物种。为了阐明属内物种之间的系统发育关系,了解其物种多样性,特别是在亚洲,研究了来自五大洲(非洲、亚洲、澳大利亚、欧洲和北美/中美洲)的属资料。根据编码RNA聚合酶II (RPB1和RPB2)最大和第二大亚基的4个基因的核苷酸序列,重建了双胞菌的系统发育;翻译延伸因子亚基1-α (TEF1);线粒体细胞色素氧化酶亚基3 (COX3)。基于分子系统发育、形态特征、寄主树关联和地理分布模式的综合结果,支持了由两组组成的新分类,即Strobilomyces组和Echinati组。利用系谱一致性系统发生物种识别(GCPSR)方法,在亚洲至少可以划分出33个系统发生物种,所有这些物种都有形态学特征支持,还有5个系统发生物种有待描述。中国西南部的山区尤为特殊,至少有21种,很可能是物种多样化的中心。我们进一步将标本与25种球芽菌的模式标本进行了比较。我们的比较表明,共有31个不同的种,而S. sanmingensis、S. verruculosus、S. subnigricans和S. zangii/S。它们分别是S. mirandus、S. giganteus、S. alpinus和S. seminudus的同义词。本文介绍了8个新种,即:白刺棘虫、炭疽棘虫、calidus棘虫、cingulatus棘虫、densisquamsus棘虫、douformis棘虫、microreticulatus棘虫和pinophilus棘虫。提供了亚洲双孢菌种的二分类钥匙。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Phylogeny and species delimitation of <i>Strobilomyces</i> (<i>Boletaceae</i>), with an emphasis on the Asian species.

Phylogeny and species delimitation of <i>Strobilomyces</i> (<i>Boletaceae</i>), with an emphasis on the Asian species.

Phylogeny and species delimitation of <i>Strobilomyces</i> (<i>Boletaceae</i>), with an emphasis on the Asian species.

Phylogeny and species delimitation of Strobilomyces (Boletaceae), with an emphasis on the Asian species.

Strobilomyces is broadly distributed geographically and serves an important ecological function. However, it has been difficult to delimit species within the genus, primarily due to developmental variations and phenotypic plasticity. To elucidate phylogenetic relationships among species within the genus and to understand its species diversity, especially in Asia, materials of the genus collected from five continents (Africa, Asia, Australia, Europe, and North/Central America) were investigated. The phylogeny of Strobilomyces was reconstructed based on nucleotide sequences of four genes coding for: the largest and the second largest subunits of the RNA polymerase II (RPB1 and RPB2); the translation elongation factor subunit 1-α (TEF1); and the mitochondrial cytochrome oxidase subunit 3 (COX3). The combined results based on molecular phylogenetics, morphological characters, host tree associations, and geographical distribution patterns support a new classification consisting of two sections, sect. Strobilomyces and sect. Echinati. Using the genealogical concordance phylogenetic species recognition (GCPSR) approach, at least 33 phylogenetic species in Asia can be delimited, all of which are supported by morphological features, and five phylogenetic species remain to be described. The mountainous region of Southwest China is especially special, containing at least 21 species and likely represents a centre of diversification. We further compared our specimens with the type specimens of 25 species of Strobilomyces. Our comparisons suggest that, there are a total of 31 distinct species, while S. sanmingensis, S. verruculosus, S. subnigricans, and S. zangii/S. areolatus, are synonyms of S. mirandus, S. giganteus, S. alpinus and S. seminudus, respectively. Eight new species, namely, S. albidus, S. anthracinus, S. calidus, S. cingulatus, S. densisquamosus, S. douformis, S. microreticulatus and S. pinophilus, are described. A dichotomous key to the Asian Strobilomyces species is provided.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Persoonia
Persoonia MYCOLOGY-
CiteScore
17.70
自引率
5.50%
发文量
10
审稿时长
3 months
期刊介绍: Persoonia aspires to publish papers focusing on the molecular systematics and evolution of fungi. Additionally, it seeks to advance fungal taxonomy by employing a polythetic approach to elucidate the genuine phylogeny and relationships within the kingdom Fungi. The journal is dedicated to disseminating high-quality papers that unravel both known and novel fungal taxa at the DNA level. Moreover, it endeavors to provide fresh insights into evolutionary processes and relationships. The scope of papers considered encompasses research articles, along with topical and book reviews.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信