Coprinopsis cinerea参考单核Okayama 7/#130和同核AmutBmut转化的选择标记。

Q1 Agricultural and Biological Sciences
Fungal Biology and Biotechnology Pub Date : 2020-10-12 eCollection Date: 2020-01-01 DOI:10.1186/s40694-020-00105-0
Bastian Dörnte, Can Peng, Zemin Fang, Aysha Kamran, Cut Yulvizar, Ursula Kües
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引用次数: 5

摘要

背景:从蘑菇Coprinopsis cinerea中测序了两个参考菌株,单核冈山7/#130 (OK130)和自相容的同核AmutBmut。在OK130 (ade8-1)和AmutBmut (pab1-1)中,腺嘌呤-营养不良(adenine-auxotrophy)和对氨基苯甲酸(PABA)-营养不良(para- aminobzoic acid, PABA)为转化提供了选择标记。在这两株菌株中,同核体AmutBmut之前分别转化为paba原生型和细菌耐潮霉素标记物hph。结果:基因ade8编码一种双功能酶,其n端甘氨酸酰胺核糖核苷酸合成酶(GARS)和c端氨基咪唑核糖核苷酸合成酶(AIRS)结构域分别是嘌呤从头合成步骤2和步骤5所必需的。在OK130中,ade8-1的错义突变使残基N231被GARS结构域的a环识别为D231。新的ade8 +载体pCcAde8在转化中补充了OK130的缺陷。与trp1 +质粒不同,pCcAde8在单载体上的转化率和ade8 +选择的共转化率同样高,而trp1 +质粒在色氨酸合成酶缺陷互补的单载体转化中表现出自杀式反馈效应。与其他质粒一样,未选择的pCcAde8有助于trp1菌株与trp1 +选择载体的共转化,以克服转移的trp1 +的自杀效应。在腺嘌呤选择和未选择DNA的核整合下,pCcAde8在OK130中的共转化率高达80%。不同漆酶基因的共转化率达26-42%,与lcc9沉默载体的共转化率高达67%。细菌基因hph也可以作为OK130转化子的另一种选择标记,尽管效率较低,但具有同样高的共转化率。我们进一步发现,AmutBmut中的pab1-1缺陷是由于一个错义突变,该突变将c端pab结构域中与choris酸结合的保守PIKGT基序改变为突变的4-氨基-4-脱氧choris酸合成酶中的PIKGT基序。结论:C. cinerea参考菌株OK130和AmutBmut在转化过程中存在ade8-1和pab1-1缺陷。pCcAde8是一种新的转化载体,可用于首次转化的单核细胞OK130的单转化和共转化的选择。细菌基因hph也可以作为OK130的附加选择标记,使得与ade8 +的连续转化成为可能。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Selection markers for transformation of the sequenced reference monokaryon Okayama 7/#130 and homokaryon AmutBmut of <i>Coprinopsis cinerea</i>.

Selection markers for transformation of the sequenced reference monokaryon Okayama 7/#130 and homokaryon AmutBmut of <i>Coprinopsis cinerea</i>.

Selection markers for transformation of the sequenced reference monokaryon Okayama 7/#130 and homokaryon AmutBmut of <i>Coprinopsis cinerea</i>.

Selection markers for transformation of the sequenced reference monokaryon Okayama 7/#130 and homokaryon AmutBmut of Coprinopsis cinerea.

Background: Two reference strains have been sequenced from the mushroom Coprinopsis cinerea, monokaryon Okayama 7/#130 (OK130) and the self-compatible homokaryon AmutBmut. An adenine-auxotrophy in OK130 (ade8-1) and a para-aminobenzoic acid (PABA)-auxotrophy in AmutBmut (pab1-1) offer selection markers for transformations. Of these two strains, homokaryon AmutBmut had been transformed before to PABA-prototrophy and with the bacterial hygromycin resistance marker hph, respectively.

Results: Gene ade8 encodes a bifunctional enzyme with an N-terminal glycinamide ribonucleotide synthase (GARS) and a C-terminal aminoimidazole ribonucleotide synthase (AIRS) domain required for steps 2 and 5 in the de novo biosynthesis of purines, respectively. In OK130, a missense mutation in ade8-1 rendered residue N231 for ribose recognition by the A loop of the GARS domain into D231. The new ade8 + vector pCcAde8 complements the auxotrophy of OK130 in transformations. Transformation rates with pCcAde8 in single-vector and co-transformations with ade8 +-selection were similarly high, unlike for trp1 + plasmids which exhibit suicidal feedback-effects in single-vector transformations with complementation of tryptophan synthase defects. As various other plasmids, unselected pCcAde8 helped in co-transformations of trp1 strains with a trp1 +-selection vector to overcome suicidal effects by transferred trp1 +. Co-transformation rates of pCcAde8 in OK130 under adenine selection with nuclear integration of unselected DNA were as high as 80% of clones. Co-transformation rates of expressed genes reached 26-42% for various laccase genes and up to 67% with lcc9 silencing vectors. The bacterial gene hph can also be used as another, albeit less efficient, selection marker for OK130 transformants, but with similarly high co-transformation rates. We further show that the pab1-1 defect in AmutBmut is due to a missense mutation which changed the conserved PIKGT motif for chorismate binding in the C-terminal PabB domain to PIEGT in the mutated 4-amino-4-deoxychorismate synthase.

Conclusions: ade8-1 and pab1-1 auxotrophic defects in C. cinerea reference strains OK130 and AmutBmut for complementation in transformation are described. pCcAde8 is a new transformation vector useful for selection in single and co-transformations of the sequenced monokaryon OK130 which was transformed for the first time. The bacterial gene hph can also be used as an additional selection marker in OK130, making in combination with ade8 + successive rounds of transformation possible.

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来源期刊
Fungal Biology and Biotechnology
Fungal Biology and Biotechnology Agricultural and Biological Sciences-Ecology, Evolution, Behavior and Systematics
CiteScore
10.20
自引率
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发文量
17
审稿时长
9 weeks
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