Justine Daudi Maganira, Winifrida Kidima, Chacha John Mwita, Peter Halvarsson, Johan Höglund
{"title":"坦桑尼亚Kongwa地区农村土壤被猪带绦虫卵DNA污染。","authors":"Justine Daudi Maganira, Winifrida Kidima, Chacha John Mwita, Peter Halvarsson, Johan Höglund","doi":"10.1080/20008686.2020.1772668","DOIUrl":null,"url":null,"abstract":"<p><p>The presence of<i>Taenia solium</i> DNA from eggs in soils around the households in four Tanzanian villages in Kongwa district were analysed in relation to seasonal fluctuations and infection risk implications. A total of 192 pooled soil samples from five sampling points per household were examined by droplet digital Polymerase Chain Reaction (ddPCR) from 96 pig-keeping households both during the dry and rainy seasons. The pooled samples were first processed by a flotation-double sieving technique, followed by screening for worm DNA employing universal primers targeting the mitochondrial cytochrome c oxidase subunit I (<i>cox1</i>) gene of human taeniid species and some other helminths. All DNA positive samples were later confirmed by a specific ddPCR probe assay targeting the mitochondrial <i>cox1</i> gene of <i>T. solium</i>. A total of 17.2% (n = 33) samples were positive with the universal ddPCR, whereas <i>T. solium</i> DNA was confirmed by the specific ddPCR only in 3.1% (n = 3) of the surveyed households. The detection of <i>T. solium</i> DNA in this study spells out a low risk of exposure to <i>T. solium</i> eggs from contaminated household soil. Based on our results, ddPCR seems to be a promising technology for screening <i>T. solium</i> eggs in soil.</p>","PeriodicalId":37446,"journal":{"name":"Infection Ecology and Epidemiology","volume":"10 1","pages":"1772668"},"PeriodicalIF":0.0000,"publicationDate":"2020-06-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/20008686.2020.1772668","citationCount":"7","resultStr":"{\"title\":\"Soil contamination by Taenia solium egg DNA in rural villages in Kongwa district, Tanzania.\",\"authors\":\"Justine Daudi Maganira, Winifrida Kidima, Chacha John Mwita, Peter Halvarsson, Johan Höglund\",\"doi\":\"10.1080/20008686.2020.1772668\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The presence of<i>Taenia solium</i> DNA from eggs in soils around the households in four Tanzanian villages in Kongwa district were analysed in relation to seasonal fluctuations and infection risk implications. A total of 192 pooled soil samples from five sampling points per household were examined by droplet digital Polymerase Chain Reaction (ddPCR) from 96 pig-keeping households both during the dry and rainy seasons. The pooled samples were first processed by a flotation-double sieving technique, followed by screening for worm DNA employing universal primers targeting the mitochondrial cytochrome c oxidase subunit I (<i>cox1</i>) gene of human taeniid species and some other helminths. All DNA positive samples were later confirmed by a specific ddPCR probe assay targeting the mitochondrial <i>cox1</i> gene of <i>T. solium</i>. A total of 17.2% (n = 33) samples were positive with the universal ddPCR, whereas <i>T. solium</i> DNA was confirmed by the specific ddPCR only in 3.1% (n = 3) of the surveyed households. The detection of <i>T. solium</i> DNA in this study spells out a low risk of exposure to <i>T. solium</i> eggs from contaminated household soil. Based on our results, ddPCR seems to be a promising technology for screening <i>T. solium</i> eggs in soil.</p>\",\"PeriodicalId\":37446,\"journal\":{\"name\":\"Infection Ecology and Epidemiology\",\"volume\":\"10 1\",\"pages\":\"1772668\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2020-06-04\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1080/20008686.2020.1772668\",\"citationCount\":\"7\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Infection Ecology and Epidemiology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1080/20008686.2020.1772668\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"Environmental Science\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Infection Ecology and Epidemiology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1080/20008686.2020.1772668","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"Environmental Science","Score":null,"Total":0}
Soil contamination by Taenia solium egg DNA in rural villages in Kongwa district, Tanzania.
The presence ofTaenia solium DNA from eggs in soils around the households in four Tanzanian villages in Kongwa district were analysed in relation to seasonal fluctuations and infection risk implications. A total of 192 pooled soil samples from five sampling points per household were examined by droplet digital Polymerase Chain Reaction (ddPCR) from 96 pig-keeping households both during the dry and rainy seasons. The pooled samples were first processed by a flotation-double sieving technique, followed by screening for worm DNA employing universal primers targeting the mitochondrial cytochrome c oxidase subunit I (cox1) gene of human taeniid species and some other helminths. All DNA positive samples were later confirmed by a specific ddPCR probe assay targeting the mitochondrial cox1 gene of T. solium. A total of 17.2% (n = 33) samples were positive with the universal ddPCR, whereas T. solium DNA was confirmed by the specific ddPCR only in 3.1% (n = 3) of the surveyed households. The detection of T. solium DNA in this study spells out a low risk of exposure to T. solium eggs from contaminated household soil. Based on our results, ddPCR seems to be a promising technology for screening T. solium eggs in soil.
期刊介绍:
Infection Ecology & Epidemiology aims to stimulate inter-disciplinary collaborations dealing with a range of subjects, from the plethora of zoonotic infections in humans, over diseases with implication in wildlife ecology, to advanced virology and bacteriology. The journal specifically welcomes papers from studies where researchers from multiple medical and ecological disciplines are collaborating so as to increase our knowledge of the emergence, spread and effect of new and re-emerged infectious diseases in humans, domestic animals and wildlife. Main areas of interest include, but are not limited to: 1.Zoonotic microbioorganisms 2.Vector borne infections 3.Gastrointestinal pathogens 4.Antimicrobial resistance 5.Zoonotic microbioorganisms in changing environment