用线粒体细胞色素氧化酶亚基I (COI)基因序列方法推断印度安达曼和尼科巴群岛中Aplousobranchiata和Phlebobranchiata Ascidians(门:脊索动物)的DNA条形码:首次报道。

Rajaram Murugan, Gnanakkan Ananthan, Anandakumar Arunkumar
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引用次数: 1

摘要

海鞘(脊索动物门)是一种无肢的滤食性海洋动物,通过观察其不同生命阶段的形态和解剖特征,可以对海鞘进行物种鉴定。然而,这种方法是劳动密集型的,耗时的,对于非专业人员来说非常困难,特别是在处理现场收集时。Aplousobranchiata和Phlebobranchiata是被囊动物中最大的类群,形态学和分子数据表明Didemnidae和Ascidiidae是单系的,但每个属的单系性和它们的系统发育关系仍然知之甚少。因此,本研究旨在建立Aplousobranchiata和Phlebobranchiata两目海鞘的DNA条形码,即Diplosoma listerianum、Lissoclinum fragile、Didemnum psammatode、Phallusia fumigata和Phallusia ingeria,并对采集自安达曼和尼科巴群岛的海鞘进行测序并提交到genbank。群落结构、扫描电子显微镜(SEM)观察海鞘的针状体、幼虫类型和动物形成是鉴别海鞘的重要形态学特征。BLAST结果证实了D. listerium KP842724(98%)、L. fragile KP842726(100%)、D. psammatode KP779902(99%)、P. fumigata KP779904(99%)和P. ingeria KP842727(100%)的相似性,这是安达曼和尼科巴群岛海鞘线粒体COI基因的首次报道。我们探索了CO1基因序列在分子水平上的鉴定和mtDNA数据在评估海鞘物种系统发育关系中的作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
DNA bar coding of Aplousobranchiata and Phlebobranchiata Ascidians (Phylum:Chordata) inferred from mitochondrial cytochrome oxidase subunit I (COI) gene sequence approach in Andaman and Nicobar Islands, India: a first report.

Ascidians (Phylum: Chordata) are sessile and filter-feeding marine animal, species identification of ascidians is possible by observing various morphological and anatomical features in various stages of life span. However, this method is labor intensive, time-consuming and very difficult for non-specialists particularly when dealing with field collections. Suborder Aplousobranchiata and Phlebobranchiata is the largest group of tunicates within, morphological and molecular data suggest that Didemnidae and Ascidiidae are monophyletic, but the monophyly of each genus and their phylogenetic relationships are still poorly understood. Therefore, this study was aimed to develop DNA barcodes of ascidians belonging to the orders of Aplousobranchiata and Phlebobranchiata species namely Diplosoma listerianum, Lissoclinum fragile, Didemnum psammatode, Phallusia fumigata and Phallusia ingeria collected from Andaman and Nicobar Islands were sequenced and submitted in Gen Bank. Colony structure, Scanning Electron Microscope (SEM) for spicules of colonial ascidians, larval type and zooids formation were found to be the most useful morphological characters for discriminating the species. Our BLAST results proved D. Listerianum KP842724 (98%) L. fragile KP842726 (100%) D. psammatode KP779902 (99%), P. fumigata KP779904 (99%) and P. ingeria KP842727 (100%) similarity and this is the first report of mitochondrial COI gene of these ascidians from Andaman and Nicobar Islands. We explored the usefulness of CO1 gene sequences for molecular level identification and mtDNA data in assessing a phylogenetic relationship of ascidian species.

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