Chao-Wen She, Ying Mao, Xiang-Hui Jiang, Chun-Ping He
{"title":"五种野生豆科植物的分子细胞遗传学比较。","authors":"Chao-Wen She, Ying Mao, Xiang-Hui Jiang, Chun-Ping He","doi":"10.3897/CompCytogen.v14i2.51154","DOIUrl":null,"url":null,"abstract":"<p><p>To extend our knowledge on karyotype variation of the genus <i>Vigna</i> Savi, 1824, the chromosomal organization of rRNA genes and fluorochrome banding patterns of five wild <i>Vigna</i> species were studied. Sequential combined PI (propidium iodide) and DAPI (4',6-diamidino-2-phenylindole) (CPD) staining and fluorescence <i>in situ</i> hybridization (FISH) with 5S and 45S rDNA probes were used to analyze the karyotypes of <i>V. luteola</i> (Jacquin, 1771) Bentham, 1959, <i>V. vexillata</i> (Linnaeus, 1753) A. Richard, 1845, <i>V. minima</i> (Roxburgh, 1832) Ohwi & H. Ohashi, 1969, <i>V. trilobata</i> (Linnaeus, 1753) Verdcourt, 1968, and <i>V. caracalla</i> (Linnaeus, 1753) Verdcourt,1970. For further phylogenetic analysis, genomic <i>in situ</i> hybridization (GISH) with the genomic DNA of <i>V. umbellata</i> (Thunberg, 1794) Ohwi & H.Ohashi, 1969 onto the chromosomes of five wild <i>Vigna</i> species was also performed. Detailed karyotypes were established for the first time using chromosome measurements, fluorochrome bands, and rDNA-FISH signals. All species had chromosome number 2n = 2x = 22, and symmetrical karyotypes that composed of only metacentric or metacentric and submetacentric chromosomes. CPD staining revealed all 45S rDNA sites in the five species analyzed, (peri)centromeric GC-rich heterochromatin in <i>V. luteola</i>, <i>V. trilobata</i> and <i>V. caracalla</i>, interstitial GC-rich and pericentromeric AT-rich heterochromatin in <i>V. caracalla</i>. rDNA-FISH revealed two 5S loci in <i>V. caracalla</i> and one 5S locus in the other four species; one 45S locus in <i>V. luteola</i> and <i>V. caracalla</i>, two 45S loci in <i>V. vexillata</i> and <i>V. trilobata</i>, and five 45S loci in <i>V. minima</i>. The karyotypes of the studied species could be clearly distinguished by the karyotypic parameters, and the patterns of the fluorochrome bands and the rDNA sites, which revealed high interspecific variation among the five species. The <i>V. umbellata</i> genomic DNA probe produced weak signals in all proximal regions of <i>V. luteola</i> and all (peri)centromeric regions of <i>V. trilobata</i>. The combined data demonstrate that distinct genome differentiation has occurred among the five species during evolution. The phylogenetic relationships between the five wild species and related cultivated species of <i>Vigna</i> are discussed based on our present and previous molecular cytogenetic data.</p>","PeriodicalId":50656,"journal":{"name":"Comparative Cytogenetics","volume":"14 2","pages":"243-264"},"PeriodicalIF":1.0000,"publicationDate":"2020-06-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7334243/pdf/","citationCount":"3","resultStr":"{\"title\":\"Comparative molecular cytogenetic characterization of five wild <i>Vigna</i> species (Fabaceae).\",\"authors\":\"Chao-Wen She, Ying Mao, Xiang-Hui Jiang, Chun-Ping He\",\"doi\":\"10.3897/CompCytogen.v14i2.51154\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>To extend our knowledge on karyotype variation of the genus <i>Vigna</i> Savi, 1824, the chromosomal organization of rRNA genes and fluorochrome banding patterns of five wild <i>Vigna</i> species were studied. Sequential combined PI (propidium iodide) and DAPI (4',6-diamidino-2-phenylindole) (CPD) staining and fluorescence <i>in situ</i> hybridization (FISH) with 5S and 45S rDNA probes were used to analyze the karyotypes of <i>V. luteola</i> (Jacquin, 1771) Bentham, 1959, <i>V. vexillata</i> (Linnaeus, 1753) A. Richard, 1845, <i>V. minima</i> (Roxburgh, 1832) Ohwi & H. Ohashi, 1969, <i>V. trilobata</i> (Linnaeus, 1753) Verdcourt, 1968, and <i>V. caracalla</i> (Linnaeus, 1753) Verdcourt,1970. For further phylogenetic analysis, genomic <i>in situ</i> hybridization (GISH) with the genomic DNA of <i>V. umbellata</i> (Thunberg, 1794) Ohwi & H.Ohashi, 1969 onto the chromosomes of five wild <i>Vigna</i> species was also performed. Detailed karyotypes were established for the first time using chromosome measurements, fluorochrome bands, and rDNA-FISH signals. All species had chromosome number 2n = 2x = 22, and symmetrical karyotypes that composed of only metacentric or metacentric and submetacentric chromosomes. CPD staining revealed all 45S rDNA sites in the five species analyzed, (peri)centromeric GC-rich heterochromatin in <i>V. luteola</i>, <i>V. trilobata</i> and <i>V. caracalla</i>, interstitial GC-rich and pericentromeric AT-rich heterochromatin in <i>V. caracalla</i>. rDNA-FISH revealed two 5S loci in <i>V. caracalla</i> and one 5S locus in the other four species; one 45S locus in <i>V. luteola</i> and <i>V. caracalla</i>, two 45S loci in <i>V. vexillata</i> and <i>V. trilobata</i>, and five 45S loci in <i>V. minima</i>. The karyotypes of the studied species could be clearly distinguished by the karyotypic parameters, and the patterns of the fluorochrome bands and the rDNA sites, which revealed high interspecific variation among the five species. The <i>V. umbellata</i> genomic DNA probe produced weak signals in all proximal regions of <i>V. luteola</i> and all (peri)centromeric regions of <i>V. trilobata</i>. The combined data demonstrate that distinct genome differentiation has occurred among the five species during evolution. The phylogenetic relationships between the five wild species and related cultivated species of <i>Vigna</i> are discussed based on our present and previous molecular cytogenetic data.</p>\",\"PeriodicalId\":50656,\"journal\":{\"name\":\"Comparative Cytogenetics\",\"volume\":\"14 2\",\"pages\":\"243-264\"},\"PeriodicalIF\":1.0000,\"publicationDate\":\"2020-06-26\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7334243/pdf/\",\"citationCount\":\"3\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Comparative Cytogenetics\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.3897/CompCytogen.v14i2.51154\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2020/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q4\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Comparative Cytogenetics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3897/CompCytogen.v14i2.51154","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2020/1/1 0:00:00","PubModel":"eCollection","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 3
摘要
为了进一步了解野葡萄属(Vigna Savi, 1824)的核型变异,对5个野葡萄种的rRNA基因的染色体组织和荧光带型进行了研究。采用序列联合PI(碘化丙啶)和DAPI(4′,6-二氨基-2-苯基吲哚)(CPD)染色和荧光原位杂交(FISH)技术,结合5S和45S rDNA探针,分析了V. luteola (Jacquin, 1771) Bentham, 1959, V. vexillata (Linnaeus, 1753) A. Richard, 1845, V. minima (Roxburgh, 1832) Ohwi和H. Ohashi, 1969, V. trilobata (Linnaeus, 1753) Verdcourt, 1968和V. caracalla (Linnaeus, 1753) Verdcourt的核型。为了进一步的系统发育分析,还将V. umbellata (Thunberg, 1794) Ohwi & H.Ohashi, 1969的基因组DNA与5个野生Vigna种的染色体进行了基因组原位杂交(GISH)。利用染色体测量、荧光染色带和rDNA-FISH信号首次建立了详细的核型。所有物种的染色体数目均为2n = 2x = 22,且核型均为对称型,染色体仅为匀心型或匀心型和亚匀心型。CPD染色显示了所分析的5个物种的所有45S rDNA位点,叶黄、三叶和卡拉卡拉的(周围)着丝粒型富gc异染色质,卡拉卡拉的间质型富gc异染色质和间质型富at异染色质。rDNA-FISH检测结果显示,柠条中有2个5S位点,其他4种中有1个5S位点;5个45S位点在小叶蝉和大叶蝉中,2个45S位点在刺叶蝉和三叶蝉中,5个45S位点在小叶蝉中。通过核型参数、荧光带和rDNA位点的模式可以清楚地区分所研究物种的核型,表明5种物种之间存在较大的种间差异。伞形弧菌基因组DNA探针在叶黄弧菌的所有近端区域和三叶弧菌的所有(周围)着丝点区域产生弱信号。综合数据表明,在进化过程中,这五个物种之间发生了明显的基因组分化。根据我们现有和以往的分子细胞遗传学资料,讨论了五种野生种和近缘栽培种之间的系统发育关系。
Comparative molecular cytogenetic characterization of five wild Vigna species (Fabaceae).
To extend our knowledge on karyotype variation of the genus Vigna Savi, 1824, the chromosomal organization of rRNA genes and fluorochrome banding patterns of five wild Vigna species were studied. Sequential combined PI (propidium iodide) and DAPI (4',6-diamidino-2-phenylindole) (CPD) staining and fluorescence in situ hybridization (FISH) with 5S and 45S rDNA probes were used to analyze the karyotypes of V. luteola (Jacquin, 1771) Bentham, 1959, V. vexillata (Linnaeus, 1753) A. Richard, 1845, V. minima (Roxburgh, 1832) Ohwi & H. Ohashi, 1969, V. trilobata (Linnaeus, 1753) Verdcourt, 1968, and V. caracalla (Linnaeus, 1753) Verdcourt,1970. For further phylogenetic analysis, genomic in situ hybridization (GISH) with the genomic DNA of V. umbellata (Thunberg, 1794) Ohwi & H.Ohashi, 1969 onto the chromosomes of five wild Vigna species was also performed. Detailed karyotypes were established for the first time using chromosome measurements, fluorochrome bands, and rDNA-FISH signals. All species had chromosome number 2n = 2x = 22, and symmetrical karyotypes that composed of only metacentric or metacentric and submetacentric chromosomes. CPD staining revealed all 45S rDNA sites in the five species analyzed, (peri)centromeric GC-rich heterochromatin in V. luteola, V. trilobata and V. caracalla, interstitial GC-rich and pericentromeric AT-rich heterochromatin in V. caracalla. rDNA-FISH revealed two 5S loci in V. caracalla and one 5S locus in the other four species; one 45S locus in V. luteola and V. caracalla, two 45S loci in V. vexillata and V. trilobata, and five 45S loci in V. minima. The karyotypes of the studied species could be clearly distinguished by the karyotypic parameters, and the patterns of the fluorochrome bands and the rDNA sites, which revealed high interspecific variation among the five species. The V. umbellata genomic DNA probe produced weak signals in all proximal regions of V. luteola and all (peri)centromeric regions of V. trilobata. The combined data demonstrate that distinct genome differentiation has occurred among the five species during evolution. The phylogenetic relationships between the five wild species and related cultivated species of Vigna are discussed based on our present and previous molecular cytogenetic data.
期刊介绍:
Comparative Cytogenetics is a peer-reviewed, open-access, rapid online journal launched to accelerate research on all aspects of plant and animal cytogenetics, karyosystematics, and molecular systematics.
All published papers can be freely copied, downloaded, printed and distributed at no charge for the reader. Authors are thus encouraged to post the pdf files of published papers on their homepages or elsewhere to expedite distribution. There is no charge for color.