iTRAQ定量蛋白质组学在家族性瘢痕疙瘩中的应用

中华整形外科杂志 Pub Date : 2017-03-01
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引用次数: 0

摘要

目的:通过比较家族性瘢痕疙瘩(FK)、散发性瘢痕疙瘩(SK)、肥厚性瘢痕(HS)、正常瘢痕(NS)的蛋白表达差异,鉴定家族性瘢痕疙瘩组织中特殊的生物标志物和差异表达蛋白,探讨家族性瘢痕疙瘩的发病特点。方法:采用定量蛋白质组等压标签相对绝对定量(iTRAQ)标记技术,对FK、SK、HS和NS组织标本(每组6例)进行消化、标记和分析。以差异大于1.2倍和P < 0.05为差异表达蛋白的选择标准。然后应用生物信息学分析。Western Blot分析验证2个差异蛋白的表达。结果:共鉴定出2 450个差异表达蛋白。与NS相比,FK中鉴定出250个上调蛋白,281个下调蛋白;SK中鉴定出281个上调蛋白,232个下调蛋白;HS中鉴定出199个上调蛋白,233个下调蛋白。与SK相比,FK中鉴定出64个上调蛋白,164个下调蛋白;HS中鉴定出79个上调蛋白,169个下调蛋白。与HS相比,FK中共鉴定出124个上调蛋白和115个下调蛋白。这些不同的蛋白集中在细胞外基质蛋白、细胞粘附和生物代谢等重要信号通路中。Western Blot验证P3H1和RCN-3两种差异表达蛋白的变异趋势。结论:蛋白质组学分析可鉴别瘢痕疙瘩、肥大疤痕与正常皮肤的变异蛋白。进一步研究这些差异蛋白可能会揭示瘢痕疙瘩的发病机制,并为其提供新的治疗方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
[The application of iTRAQ quantitative proteomics in familial keloid].

Objective: To identify the special biomarkers and the differentially expressed proteins in keloid tissue and to explore the pathogenesis characteristics of familial keloid by comparing the protein expression differences among familial keloid(FK),sporadic keloid (SK),hypertrophy scar (HS),normal scar (NS).

Methods: The tissue specimens of FK,SK,HS and NS(6 specimens in each group),were digested, taged and analysed using quantitative proteomic isobaric tags for relative and absolute quantitation (iTRAQ) labeling technology. A difference greater than 1.2 folds and P < 0.05 were selection criteria for differencial expression proteins. Then bioinformatics analysis was applied. The expressions of 2 differential proteins were validated using Western Blot analysis.

Results: A total of 2 450 differentially expressed proteins were identified. Compared with NS,250 up-regulated and 281 down-regulated proteins were identified in FK;281 up-regulated and 232 down-regulated proteins were identified in SK;199 up-regulated and 233 down-regulated proteins were identified in HS. Compared with SK,64 up-regulated and 164 down regulated proteins were identified in FK;79 up-regulated and 169 down-regulated proteins were identified in HS. Compared with HS,124 up-regulated and 115 down-regulated proteins were identified in FK. These different proteins were concentrated in several vital signal pathways such as the extracellular matrix protein, cell adhesion and biological metabolism pathways. The variation trend of 2 differentially expressed proteins (P3H1 and RCN-3) were validated by Western Blot.

Conclusions: Proteomic analysis can identify the proteins with variance of keloid, hypertrophy scar and normal skin. Further investigations of these differential proteins may reveal the pathogenesis of keloid and provide new treatments for it.

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