基于现象学的多尺度模型是理解细胞膜和细胞器形态的工具。

N Ramakrishnan, Ravi Radhakrishnan
{"title":"基于现象学的多尺度模型是理解细胞膜和细胞器形态的工具。","authors":"N Ramakrishnan,&nbsp;Ravi Radhakrishnan","doi":"10.1016/bs.adplan.2015.06.004","DOIUrl":null,"url":null,"abstract":"<p><p>An intriguing question in cell biology is \"how do cells regulate their shape?\" It is commonly believed that the observed cellular morphologies are a result of the complex interaction among the lipid molecules (constituting the cell membrane), and with a number of other macromolecules, such as proteins. It is also believed that the common biophysical processes essential for the functioning of a cell also play an important role in cellular morphogenesis. At the cellular scale-where typical dimensions are in the order of micrometers-the effects arising from the molecular scale can either be modeled as equilibrium or non-equilibrium processes. In this chapter, we discuss the dynamically triangulated Monte Carlo technique to model and simulate membrane morphologies at the cellular scale, which in turn can be used to investigate several questions related to shape regulation in cells. In particular, we focus on two specific problems within the framework of isotropic and anisotropic elasticity theories: namely, (i) the origin of complex, physiologically relevant, membrane shapes due to the interaction of the membrane with curvature remodeling proteins, and (ii) the genesis of steady state cellular shapes due to the action of non-equilibrium forces that are generated by the fission and fusion of transport vesicles and by the binding and unbinding of proteins from the parent membrane.</p>","PeriodicalId":91442,"journal":{"name":"Advances in planar lipid bilayers and liposomes","volume":"22 ","pages":"129-175"},"PeriodicalIF":0.0000,"publicationDate":"2015-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/bs.adplan.2015.06.004","citationCount":"4","resultStr":"{\"title\":\"Phenomenology based multiscale models as tools to understand cell membrane and organelle morphologies.\",\"authors\":\"N Ramakrishnan,&nbsp;Ravi Radhakrishnan\",\"doi\":\"10.1016/bs.adplan.2015.06.004\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>An intriguing question in cell biology is \\\"how do cells regulate their shape?\\\" It is commonly believed that the observed cellular morphologies are a result of the complex interaction among the lipid molecules (constituting the cell membrane), and with a number of other macromolecules, such as proteins. It is also believed that the common biophysical processes essential for the functioning of a cell also play an important role in cellular morphogenesis. At the cellular scale-where typical dimensions are in the order of micrometers-the effects arising from the molecular scale can either be modeled as equilibrium or non-equilibrium processes. In this chapter, we discuss the dynamically triangulated Monte Carlo technique to model and simulate membrane morphologies at the cellular scale, which in turn can be used to investigate several questions related to shape regulation in cells. In particular, we focus on two specific problems within the framework of isotropic and anisotropic elasticity theories: namely, (i) the origin of complex, physiologically relevant, membrane shapes due to the interaction of the membrane with curvature remodeling proteins, and (ii) the genesis of steady state cellular shapes due to the action of non-equilibrium forces that are generated by the fission and fusion of transport vesicles and by the binding and unbinding of proteins from the parent membrane.</p>\",\"PeriodicalId\":91442,\"journal\":{\"name\":\"Advances in planar lipid bilayers and liposomes\",\"volume\":\"22 \",\"pages\":\"129-175\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2015-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1016/bs.adplan.2015.06.004\",\"citationCount\":\"4\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Advances in planar lipid bilayers and liposomes\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1016/bs.adplan.2015.06.004\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Advances in planar lipid bilayers and liposomes","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1016/bs.adplan.2015.06.004","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 4

摘要

细胞生物学中一个有趣的问题是“细胞如何调节它们的形状?”人们普遍认为,观察到的细胞形态是脂质分子(构成细胞膜)和许多其他大分子(如蛋白质)之间复杂相互作用的结果。人们还认为,细胞功能所必需的共同生物物理过程在细胞形态发生中也起着重要作用。在细胞尺度上——典型的尺度是微米级——分子尺度上产生的效应可以被建模为平衡或非平衡过程。在本章中,我们讨论了动态三角蒙特卡罗技术来模拟和模拟细胞尺度上的膜形态,这反过来又可以用来研究与细胞形状调节有关的几个问题。我们特别关注各向同性和各向异性弹性理论框架内的两个具体问题:也就是说,(i)由于膜与曲率重塑蛋白的相互作用而产生的复杂的、生理上相关的膜形状的起源,以及(ii)由于运输囊泡的裂变和融合以及亲本膜上蛋白质的结合和分离所产生的非平衡力的作用而产生的稳态细胞形状的起源。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Phenomenology based multiscale models as tools to understand cell membrane and organelle morphologies.

Phenomenology based multiscale models as tools to understand cell membrane and organelle morphologies.

Phenomenology based multiscale models as tools to understand cell membrane and organelle morphologies.

An intriguing question in cell biology is "how do cells regulate their shape?" It is commonly believed that the observed cellular morphologies are a result of the complex interaction among the lipid molecules (constituting the cell membrane), and with a number of other macromolecules, such as proteins. It is also believed that the common biophysical processes essential for the functioning of a cell also play an important role in cellular morphogenesis. At the cellular scale-where typical dimensions are in the order of micrometers-the effects arising from the molecular scale can either be modeled as equilibrium or non-equilibrium processes. In this chapter, we discuss the dynamically triangulated Monte Carlo technique to model and simulate membrane morphologies at the cellular scale, which in turn can be used to investigate several questions related to shape regulation in cells. In particular, we focus on two specific problems within the framework of isotropic and anisotropic elasticity theories: namely, (i) the origin of complex, physiologically relevant, membrane shapes due to the interaction of the membrane with curvature remodeling proteins, and (ii) the genesis of steady state cellular shapes due to the action of non-equilibrium forces that are generated by the fission and fusion of transport vesicles and by the binding and unbinding of proteins from the parent membrane.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信