脑卒中后抑郁患者外周血miR-146a调控抑郁相关信号通路的生物信息学预测

Zhimin Chen, Na Wang, Risu Na, Haiyan Yu, Dan Sui, Bing Cui, Lihua Wang
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引用次数: 2

摘要

目的探讨miR-146a-5p在脑卒中后抑郁(PSD)患者外周血中的差异表达,并利用生物信息学分析其机制。选取脑卒中患者作为研究对象,采用美国国立卫生研究院卒中量表(NHISS)和汉密尔顿抑郁量表-17项(HAMD-17)评分将患者分为脑卒中后抑郁组和非脑卒中后抑郁组。采集患者外周血进行血清miR-146a-5p检测。使用Targetscan7.1、miRDB、DIANA TOOLS等数据库预测miR-146a-5p的靶基因。应用String11.0构建蛋白相互作用网络,对靶基因进行GO和KEGG通路富集分析。与N-PSD患者相比,PSD患者血清miR-146a-5p水平显著升高(P
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Bioinformatic Prediction of Depression-Related Signaling Pathways Regulated by miR-146a in Peripheral Blood of Patients with Post-Stroke Depression.

It was aimed to explore the differential expression of miR-146a-5p in peripheral blood of patients with post-stroke depression (PSD), and to analyze its mechanism using bioinformatics. Stroke patients were selected as the research objects, and were divided into PSD ones and non-post-stroke depression (N-PSD) ones with the National Institutes of Health stroke scale (NHISS) and Hamilton Depression Scale-17 terms (HAMD-17) scores. Peripheral blood of patients was collected for serum miR-146a-5p detection. Targetscan7.1, miRDB, DIANA TOOLS, and more databases were used to predict the target genes of miR-146a-5p. String11.0 was applied to construct a protein interaction network, and GO and KEGG pathway enrichment analysis of target genes was performed. Compared with that of N-PSD patients, serum miR-146a-5p levels in PSD patients were significantly increased (P<0.05). The receiver operator characteristic (ROC) curve suggested that the sensitivity and specificity of miR-146a-5p in predicting PSD were 0.703 and 0.811, respectively. The human miR-146a-5p sequence was highly conserved, with a total of 43 target genes. It involved analysis of activity, signaling pathways, and transcriptional regulation, as well as related signaling pathways such as Toll-like receptors (TLR), neurotrophic factors, and nuclear factor kappa-B (NF-κB). In conclusion, the expression level of miR-146a-5p was abnormally increased in PSD patients, and it could be taken as a candidate marker for the diagnosis of PSD. miR-146a-5p could affect PSD through signaling pathways of TLRs, neurotrophic factors, and NF-κB.

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