老化研究中的系统生物学方法。

Interdisciplinary topics in gerontology Pub Date : 2015-01-01 Epub Date: 2014-10-14 DOI:10.1159/000364981
Anuradha Chauhan, Ulf W Liebal, Julio Vera, Simone Baltrusch, Christian Junghanß, Markus Tiedge, Georg Fuellen, Olaf Wolkenhauer, Rüdiger Köhling
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引用次数: 10

摘要

衰老是一个系统过程,从组织中的分子反应和细胞间相互作用到整个器官的生理机能,在结构和功能组织的多个层面上逐步表现出来。在不同的时间和空间尺度上,关于衰老过程的生物医学相关网络相互作用的数据越来越多。为了在不同的结构、时间和空间尺度上连接老化过程,需要部署广泛的系统生物学方法。系统生物学方法不仅可以系统地处理大规模数据集(如高通量数据)和相互作用的复杂性(反馈回路,串扰),而且可以深入研究一些超越直觉推理的生物过程所表现出的非线性行为。一些公共资助机构已经确定了系统生物学在衰老研究中的协同作用。利用一个著名的公共资助项目(GERONTOSYS),我们讨论了系统生物学方法如何帮助科学家在衰老研究中找到新的前沿。我们详细介绍了一些系统生物学方法部署在财团(ROSage)的一个项目。老化研究中的系统生物学领域还处于起步阶段。它是开放的,以适应现有的系统生物学方法,从其他研究领域和设计新的老化特异性系统生物学方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Systems biology approaches in aging research.

Aging is a systemic process which progressively manifests itself at multiple levels of structural and functional organization from molecular reactions and cell-cell interactions in tissues to the physiology of an entire organ. There is ever increasing data on biomedical relevant network interactions for the aging process at different scales of time and space. To connect the aging process at different structural, temporal and spatial scales, extensive systems biological approaches need to be deployed. Systems biological approaches can not only systematically handle the large-scale datasets (like high-throughput data) and the complexity of interactions (feedback loops, cross talk), but also can delve into nonlinear behaviors exhibited by several biological processes which are beyond intuitive reasoning. Several public-funded agencies have identified the synergistic role of systems biology in aging research. Using one of the notable public-funded programs (GERONTOSYS), we discuss how systems biological approaches are helping the scientists to find new frontiers in aging research. We elaborate on some systems biological approaches deployed in one of the projects of the consortium (ROSage). The systems biology field in aging research is at its infancy. It is open to adapt existing systems biological methodologies from other research fields and devise new aging-specific systems biological methodologies.

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