Ibai Olariaga , Begoña M. Jugo , Koldo García-Etxebarria , Isabel Salcedo
{"title":"基于ITS区系统发育分析和形态学资料的欧洲Clavulina (cantharelllales,担子菌科)种划分","authors":"Ibai Olariaga , Begoña M. Jugo , Koldo García-Etxebarria , Isabel Salcedo","doi":"10.1016/j.mycres.2009.08.008","DOIUrl":null,"url":null,"abstract":"<div><p>The identification of the conventionally accepted species of <em>Clavulina</em> (<em>Cantharellales</em>, <em>Basidiomycota</em>) in Europe (<em>Clavulina amethystina</em>, <em>Clavulina cinerea</em>, <em>Clavulina cristata</em>, and <em>Clavulina rugosa</em>) is often difficult and many specimens are not straightforwardly assignable to any of those four species, which is why some authors have questioned their identity. In order to assess the status of those species, a morphological examination was combined with the molecular analysis of the ITS region. The same six major clades were obtained in the Bayesian and parsimony phylogenetic analyses, and all six clades were well-supported at least by one of the analyses. Morphological characters, such as the overall branching pattern, the presence and intensity of grey colour, the cristation of the apices, and basidiospore size and shape were to various extents correlated with the phylogenetic signal obtained from the ITS region. The congruence between the molecular analyses and morphology, rather than geographical origin, suggests the existence of several species that can be delimited using a combined phylogenetic and morphological species recognition. The analyses revealed that <em>C. cristata</em> and <em>C. rugosa</em> are well-delimited species. In contrast, more than one taxa could be subsumed under the names <em>C. amethystina</em> and <em>C. cinerea</em>, the taxonomical complexity of which is discussed. The ITS region is proved to be adequate to separate phylogenetic species of <em>Clavulina</em>.</p></div>","PeriodicalId":19045,"journal":{"name":"Mycological research","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2009-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.mycres.2009.08.008","citationCount":"27","resultStr":"{\"title\":\"Species delimitation in the European species of Clavulina (Cantharellales, Basidiomycota) inferred from phylogenetic analyses of ITS region and morphological data\",\"authors\":\"Ibai Olariaga , Begoña M. Jugo , Koldo García-Etxebarria , Isabel Salcedo\",\"doi\":\"10.1016/j.mycres.2009.08.008\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>The identification of the conventionally accepted species of <em>Clavulina</em> (<em>Cantharellales</em>, <em>Basidiomycota</em>) in Europe (<em>Clavulina amethystina</em>, <em>Clavulina cinerea</em>, <em>Clavulina cristata</em>, and <em>Clavulina rugosa</em>) is often difficult and many specimens are not straightforwardly assignable to any of those four species, which is why some authors have questioned their identity. In order to assess the status of those species, a morphological examination was combined with the molecular analysis of the ITS region. The same six major clades were obtained in the Bayesian and parsimony phylogenetic analyses, and all six clades were well-supported at least by one of the analyses. Morphological characters, such as the overall branching pattern, the presence and intensity of grey colour, the cristation of the apices, and basidiospore size and shape were to various extents correlated with the phylogenetic signal obtained from the ITS region. The congruence between the molecular analyses and morphology, rather than geographical origin, suggests the existence of several species that can be delimited using a combined phylogenetic and morphological species recognition. The analyses revealed that <em>C. cristata</em> and <em>C. rugosa</em> are well-delimited species. In contrast, more than one taxa could be subsumed under the names <em>C. amethystina</em> and <em>C. cinerea</em>, the taxonomical complexity of which is discussed. The ITS region is proved to be adequate to separate phylogenetic species of <em>Clavulina</em>.</p></div>\",\"PeriodicalId\":19045,\"journal\":{\"name\":\"Mycological research\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2009-11-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1016/j.mycres.2009.08.008\",\"citationCount\":\"27\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Mycological research\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0953756209001531\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mycological research","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0953756209001531","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Species delimitation in the European species of Clavulina (Cantharellales, Basidiomycota) inferred from phylogenetic analyses of ITS region and morphological data
The identification of the conventionally accepted species of Clavulina (Cantharellales, Basidiomycota) in Europe (Clavulina amethystina, Clavulina cinerea, Clavulina cristata, and Clavulina rugosa) is often difficult and many specimens are not straightforwardly assignable to any of those four species, which is why some authors have questioned their identity. In order to assess the status of those species, a morphological examination was combined with the molecular analysis of the ITS region. The same six major clades were obtained in the Bayesian and parsimony phylogenetic analyses, and all six clades were well-supported at least by one of the analyses. Morphological characters, such as the overall branching pattern, the presence and intensity of grey colour, the cristation of the apices, and basidiospore size and shape were to various extents correlated with the phylogenetic signal obtained from the ITS region. The congruence between the molecular analyses and morphology, rather than geographical origin, suggests the existence of several species that can be delimited using a combined phylogenetic and morphological species recognition. The analyses revealed that C. cristata and C. rugosa are well-delimited species. In contrast, more than one taxa could be subsumed under the names C. amethystina and C. cinerea, the taxonomical complexity of which is discussed. The ITS region is proved to be adequate to separate phylogenetic species of Clavulina.