Jeehun Kim, Hongyu Li, Ruiying Liu, Zhiyuan Zhang, Mingrui Yang, Carl S Winalski, Naveen Subhas, Leslie Ying, Xiaojuan Li
{"title":"3分钟内高度加速的T1ρ成像:压缩感知与深度学习重建的比较。","authors":"Jeehun Kim, Hongyu Li, Ruiying Liu, Zhiyuan Zhang, Mingrui Yang, Carl S Winalski, Naveen Subhas, Leslie Ying, Xiaojuan Li","doi":"10.1002/nbm.70226","DOIUrl":null,"url":null,"abstract":"<p><p>The purpose of this study was to compare between compressed sensing (CS) and deep learning (DL) accelerated T<sub>1ρ</sub> mapping in knee cartilage, a quantitative imaging technique that provides valuable information for disease diagnosis but requires long scan time. Both retrospectively and prospectively undersampled reconstruction were evaluated in nine volunteers including three with diagnosed pathology. For data collection, DESS images were collected for segmentation of six cartilage compartments. T<sub>1ρ</sub>-weighted 3D MAPSS sequence was used to create T<sub>1ρ</sub> maps. A 3T MRI scanner was used and GRAPPA 2 accelerated data were collected to provide 8-echo reference T<sub>1ρ</sub> maps and was retrospectively undersampled for reconstruction with two sampling schemes: 4 TSLs with each echo image undersampled by 4 (UF4_4echo), and 8 TSLs with each echo image undersampled by 8 (UF8_8echo). Separate prospectively undersampled datasets were also collected for reconstruction. Volunteers were scanned and rescanned with repositioning for repeatability comparison. Reference, retrospectively undersampled reconstruction, and prospectively undersampled reconstruction were compared by voxel-wise median normalized absolute differences (MNADs), concordance correlation coefficient (CCC), and coefficient of variation (CV) using cartilage compartment-wise mean value. As a result, for retrospective undersampling, CS showed CCC 0.992, MNAD 10.0%, and CV 1.3% for UF4_4echo, and CCC 0.988, MNAD 9.9%, and CV 1.4% for UF8_8echo. DL showed CCC 0.971, MNAD 9.8%, and CV 1.7% for UF4_4echo, and CCC 0.968, MNAD 10.6%, and CV 1.7% for UF8_8echo. For prospective undersampling, CS showed CCC 0.853 and CV 3.3% for UF4_4echo, and CCC 0.754 and CV 3.9% for UF8_8echo. DL showed CCC 0.939 and CV 2.4% for UF4_4echo and CCC 0.845 and CV 2.8% for UF8_8echo. The maps had 2.57%, 3.80%, 2.79%, 2.29%, and 2.85% scan-rescan CV, respectively, for reference, CS UF4_4echo, CS UF8_8echo, DL UF4_4echo, and DL UF8_8echo reconstructions. As a conclusion, DL provided better results compared to CS in prospectively undersampled reconstruction.</p>","PeriodicalId":19309,"journal":{"name":"NMR in Biomedicine","volume":"39 2","pages":"e70226"},"PeriodicalIF":2.7000,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12831483/pdf/","citationCount":"0","resultStr":"{\"title\":\"Highly Accelerated T<sub>1ρ</sub> Imaging in 3 min: Comparison Between Compressed Sensing and Deep Learning Reconstruction.\",\"authors\":\"Jeehun Kim, Hongyu Li, Ruiying Liu, Zhiyuan Zhang, Mingrui Yang, Carl S Winalski, Naveen Subhas, Leslie Ying, Xiaojuan Li\",\"doi\":\"10.1002/nbm.70226\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The purpose of this study was to compare between compressed sensing (CS) and deep learning (DL) accelerated T<sub>1ρ</sub> mapping in knee cartilage, a quantitative imaging technique that provides valuable information for disease diagnosis but requires long scan time. Both retrospectively and prospectively undersampled reconstruction were evaluated in nine volunteers including three with diagnosed pathology. For data collection, DESS images were collected for segmentation of six cartilage compartments. T<sub>1ρ</sub>-weighted 3D MAPSS sequence was used to create T<sub>1ρ</sub> maps. A 3T MRI scanner was used and GRAPPA 2 accelerated data were collected to provide 8-echo reference T<sub>1ρ</sub> maps and was retrospectively undersampled for reconstruction with two sampling schemes: 4 TSLs with each echo image undersampled by 4 (UF4_4echo), and 8 TSLs with each echo image undersampled by 8 (UF8_8echo). Separate prospectively undersampled datasets were also collected for reconstruction. Volunteers were scanned and rescanned with repositioning for repeatability comparison. Reference, retrospectively undersampled reconstruction, and prospectively undersampled reconstruction were compared by voxel-wise median normalized absolute differences (MNADs), concordance correlation coefficient (CCC), and coefficient of variation (CV) using cartilage compartment-wise mean value. As a result, for retrospective undersampling, CS showed CCC 0.992, MNAD 10.0%, and CV 1.3% for UF4_4echo, and CCC 0.988, MNAD 9.9%, and CV 1.4% for UF8_8echo. DL showed CCC 0.971, MNAD 9.8%, and CV 1.7% for UF4_4echo, and CCC 0.968, MNAD 10.6%, and CV 1.7% for UF8_8echo. For prospective undersampling, CS showed CCC 0.853 and CV 3.3% for UF4_4echo, and CCC 0.754 and CV 3.9% for UF8_8echo. DL showed CCC 0.939 and CV 2.4% for UF4_4echo and CCC 0.845 and CV 2.8% for UF8_8echo. The maps had 2.57%, 3.80%, 2.79%, 2.29%, and 2.85% scan-rescan CV, respectively, for reference, CS UF4_4echo, CS UF8_8echo, DL UF4_4echo, and DL UF8_8echo reconstructions. As a conclusion, DL provided better results compared to CS in prospectively undersampled reconstruction.</p>\",\"PeriodicalId\":19309,\"journal\":{\"name\":\"NMR in Biomedicine\",\"volume\":\"39 2\",\"pages\":\"e70226\"},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2026-02-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12831483/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"NMR in Biomedicine\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1002/nbm.70226\",\"RegionNum\":4,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOPHYSICS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"NMR in Biomedicine","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1002/nbm.70226","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOPHYSICS","Score":null,"Total":0}
Highly Accelerated T1ρ Imaging in 3 min: Comparison Between Compressed Sensing and Deep Learning Reconstruction.
The purpose of this study was to compare between compressed sensing (CS) and deep learning (DL) accelerated T1ρ mapping in knee cartilage, a quantitative imaging technique that provides valuable information for disease diagnosis but requires long scan time. Both retrospectively and prospectively undersampled reconstruction were evaluated in nine volunteers including three with diagnosed pathology. For data collection, DESS images were collected for segmentation of six cartilage compartments. T1ρ-weighted 3D MAPSS sequence was used to create T1ρ maps. A 3T MRI scanner was used and GRAPPA 2 accelerated data were collected to provide 8-echo reference T1ρ maps and was retrospectively undersampled for reconstruction with two sampling schemes: 4 TSLs with each echo image undersampled by 4 (UF4_4echo), and 8 TSLs with each echo image undersampled by 8 (UF8_8echo). Separate prospectively undersampled datasets were also collected for reconstruction. Volunteers were scanned and rescanned with repositioning for repeatability comparison. Reference, retrospectively undersampled reconstruction, and prospectively undersampled reconstruction were compared by voxel-wise median normalized absolute differences (MNADs), concordance correlation coefficient (CCC), and coefficient of variation (CV) using cartilage compartment-wise mean value. As a result, for retrospective undersampling, CS showed CCC 0.992, MNAD 10.0%, and CV 1.3% for UF4_4echo, and CCC 0.988, MNAD 9.9%, and CV 1.4% for UF8_8echo. DL showed CCC 0.971, MNAD 9.8%, and CV 1.7% for UF4_4echo, and CCC 0.968, MNAD 10.6%, and CV 1.7% for UF8_8echo. For prospective undersampling, CS showed CCC 0.853 and CV 3.3% for UF4_4echo, and CCC 0.754 and CV 3.9% for UF8_8echo. DL showed CCC 0.939 and CV 2.4% for UF4_4echo and CCC 0.845 and CV 2.8% for UF8_8echo. The maps had 2.57%, 3.80%, 2.79%, 2.29%, and 2.85% scan-rescan CV, respectively, for reference, CS UF4_4echo, CS UF8_8echo, DL UF4_4echo, and DL UF8_8echo reconstructions. As a conclusion, DL provided better results compared to CS in prospectively undersampled reconstruction.
期刊介绍:
NMR in Biomedicine is a journal devoted to the publication of original full-length papers, rapid communications and review articles describing the development of magnetic resonance spectroscopy or imaging methods or their use to investigate physiological, biochemical, biophysical or medical problems. Topics for submitted papers should be in one of the following general categories: (a) development of methods and instrumentation for MR of biological systems; (b) studies of normal or diseased organs, tissues or cells; (c) diagnosis or treatment of disease. Reports may cover work on patients or healthy human subjects, in vivo animal experiments, studies of isolated organs or cultured cells, analysis of tissue extracts, NMR theory, experimental techniques, or instrumentation.