{"title":"基于核磁共振测量和对映体C-H···I-氢键单元的DFT预测的s -烷基硫代离子液体的分子结构,非常规地使用QST2和IRC方法。","authors":"Ryszard B Nazarski, Gerhard Hägele","doi":"10.1021/acs.jpca.5c05146","DOIUrl":null,"url":null,"abstract":"<p><p>Using atypical input geometries that led to asymmetric transition state (TS) structures, it was possible to construct the raw geometries of a majority of both units of the title ionic liquid <b>1a</b> of type A/B in the D<sub>2</sub>O solution, mainly in a combination of QST2 and IRC methods. Their refinement in all-electron DFT-B3LYP calculations using a locally dense basis sets (LDBS) approach led to 34 complete pairs A/B as binary sets of enantiomeric forms of type A and B, which, according to time-averaged NMR spectra and calculated Gibbs free energy (Δ<i>G</i>) data, exist in a fast symmetrical two-site exchange A ⇌ B. The availability of these structurally diverse structures, in which iodine ion (I<sup>-</sup>) occupies various spatial positions, stabilized by weak C-H···I<sup>-</sup> hydrogen bonds confirmed by QTAIM analysis, made it possible to test selected DFT methods to calculate the δ<sub>H</sub>, δ<sub>C</sub>, and <sup><i>n</i></sup><i>J</i><sub>HH</sub> data against their experimental values. A modified joint two-nucleus approach (<sup>1</sup>H/<sup>13</sup>C) with factor <i>m</i><sub>H</sub> = 6 was also used. The efficiency of these predictions for an ensemble of all pairs A/B, which is the multicomponent molecular structure of <b>1a</b> at the theoretical level used, was analyzed in light of their populations arising from consideration of Δ<i>G</i> data.</p>","PeriodicalId":59,"journal":{"name":"The Journal of Physical Chemistry A","volume":" ","pages":""},"PeriodicalIF":2.8000,"publicationDate":"2025-10-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Molecular Structure of a Model <i>S</i>-Alkylthiolanium Ionic Liquid Based on NMR Measurements and DFT Predictions for Its Enantiomeric C-H···I<sup>-</sup> Hydrogen Bonded Units Achieved in an Unusual Use of QST2 and IRC Methods.\",\"authors\":\"Ryszard B Nazarski, Gerhard Hägele\",\"doi\":\"10.1021/acs.jpca.5c05146\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Using atypical input geometries that led to asymmetric transition state (TS) structures, it was possible to construct the raw geometries of a majority of both units of the title ionic liquid <b>1a</b> of type A/B in the D<sub>2</sub>O solution, mainly in a combination of QST2 and IRC methods. Their refinement in all-electron DFT-B3LYP calculations using a locally dense basis sets (LDBS) approach led to 34 complete pairs A/B as binary sets of enantiomeric forms of type A and B, which, according to time-averaged NMR spectra and calculated Gibbs free energy (Δ<i>G</i>) data, exist in a fast symmetrical two-site exchange A ⇌ B. The availability of these structurally diverse structures, in which iodine ion (I<sup>-</sup>) occupies various spatial positions, stabilized by weak C-H···I<sup>-</sup> hydrogen bonds confirmed by QTAIM analysis, made it possible to test selected DFT methods to calculate the δ<sub>H</sub>, δ<sub>C</sub>, and <sup><i>n</i></sup><i>J</i><sub>HH</sub> data against their experimental values. A modified joint two-nucleus approach (<sup>1</sup>H/<sup>13</sup>C) with factor <i>m</i><sub>H</sub> = 6 was also used. The efficiency of these predictions for an ensemble of all pairs A/B, which is the multicomponent molecular structure of <b>1a</b> at the theoretical level used, was analyzed in light of their populations arising from consideration of Δ<i>G</i> data.</p>\",\"PeriodicalId\":59,\"journal\":{\"name\":\"The Journal of Physical Chemistry A\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":2.8000,\"publicationDate\":\"2025-10-23\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"The Journal of Physical Chemistry A\",\"FirstCategoryId\":\"1\",\"ListUrlMain\":\"https://doi.org/10.1021/acs.jpca.5c05146\",\"RegionNum\":2,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"CHEMISTRY, PHYSICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"The Journal of Physical Chemistry A","FirstCategoryId":"1","ListUrlMain":"https://doi.org/10.1021/acs.jpca.5c05146","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
Molecular Structure of a Model S-Alkylthiolanium Ionic Liquid Based on NMR Measurements and DFT Predictions for Its Enantiomeric C-H···I- Hydrogen Bonded Units Achieved in an Unusual Use of QST2 and IRC Methods.
Using atypical input geometries that led to asymmetric transition state (TS) structures, it was possible to construct the raw geometries of a majority of both units of the title ionic liquid 1a of type A/B in the D2O solution, mainly in a combination of QST2 and IRC methods. Their refinement in all-electron DFT-B3LYP calculations using a locally dense basis sets (LDBS) approach led to 34 complete pairs A/B as binary sets of enantiomeric forms of type A and B, which, according to time-averaged NMR spectra and calculated Gibbs free energy (ΔG) data, exist in a fast symmetrical two-site exchange A ⇌ B. The availability of these structurally diverse structures, in which iodine ion (I-) occupies various spatial positions, stabilized by weak C-H···I- hydrogen bonds confirmed by QTAIM analysis, made it possible to test selected DFT methods to calculate the δH, δC, and nJHH data against their experimental values. A modified joint two-nucleus approach (1H/13C) with factor mH = 6 was also used. The efficiency of these predictions for an ensemble of all pairs A/B, which is the multicomponent molecular structure of 1a at the theoretical level used, was analyzed in light of their populations arising from consideration of ΔG data.
期刊介绍:
The Journal of Physical Chemistry A is devoted to reporting new and original experimental and theoretical basic research of interest to physical chemists, biophysical chemists, and chemical physicists.