宏基因组学的法医应用:方法与未来方向

IF 1.9 4区 生物学 Q4 BIOCHEMICAL RESEARCH METHODS
S. Sreekutti , Sunganani Ndomondo , Paheli Sharma , Rajesh Patel , Vishal Mevada
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引用次数: 0

摘要

微生物群落普遍存在于我们的环境中,这使得我们不可能在不干扰它们的情况下接触任何表面。人类微生物组,主要是唾液、皮肤和肠道中的细菌,可用于法医目的。人类相关和环境样本,如土壤、水等,携带微生物组,可用于地理定位推断。这些微生物组在法医调查方面具有相当大的潜力,包括许多性暴力案件、尸检、个人身份识别和地点识别。宏基因组测序的最新发展为微生物分析做出了巨大贡献。然而,由于某些问题和挑战,微生物组的法医应用仍处于起步阶段。本文综述了宏基因组学在法医科学中的应用,以及该领域专家面临的一些主要障碍。首先注意到的问题是缺乏标准化协议和研究参考数据库差。还指出了一些限制,如存储灵敏度和有限的样品。未来的研究应该集中在更标准化的调查上,以克服这些困难,并探索微生物组在法医环境中有益应用的巨大潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Forensic application of metagenomics: Methods and future directions
The microbial communities are found commonly in our environment, making it impossible to touch any surface without interfering with them. The human microbiome, primarily bacteria in the saliva, skin, and gut, can be used for forensic purposes. Human-associated and environmental samples, such as soil, water, etc., carry the microbiome, which can be used for geolocation inference. These microbiomes have considerable potential for use in forensic investigations, including many instances of sexual violence, post-mortem examinations, individual identification, and location identification. Recent developments in metagenomic sequencing have greatly contributed to microbial analysis. Yet, because of certain issues and challenges, the forensic application of microbiomes is still in its infancy. This article reviewed the use of metagenomics in forensic science and some of the main obstacles that are faced by experts in this area. The first and foremost issues noted were the lack of standardization protocols and a poor reference database for research studies. Some limitations, such as storage sensitivity and limited samples, are also indicated. Future research studies should concentrate on more standardized investigations to overcome these difficulties and explore the enormous potential of microbiomes for beneficial applications in forensic contexts.
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来源期刊
Journal of microbiological methods
Journal of microbiological methods 生物-生化研究方法
CiteScore
4.30
自引率
4.50%
发文量
151
审稿时长
29 days
期刊介绍: The Journal of Microbiological Methods publishes scholarly and original articles, notes and review articles. These articles must include novel and/or state-of-the-art methods, or significant improvements to existing methods. Novel and innovative applications of current methods that are validated and useful will also be published. JMM strives for scholarship, innovation and excellence. This demands scientific rigour, the best available methods and technologies, correctly replicated experiments/tests, the inclusion of proper controls, calibrations, and the correct statistical analysis. The presentation of the data must support the interpretation of the method/approach. All aspects of microbiology are covered, except virology. These include agricultural microbiology, applied and environmental microbiology, bioassays, bioinformatics, biotechnology, biochemical microbiology, clinical microbiology, diagnostics, food monitoring and quality control microbiology, microbial genetics and genomics, geomicrobiology, microbiome methods regardless of habitat, high through-put sequencing methods and analysis, microbial pathogenesis and host responses, metabolomics, metagenomics, metaproteomics, microbial ecology and diversity, microbial physiology, microbial ultra-structure, microscopic and imaging methods, molecular microbiology, mycology, novel mathematical microbiology and modelling, parasitology, plant-microbe interactions, protein markers/profiles, proteomics, pyrosequencing, public health microbiology, radioisotopes applied to microbiology, robotics applied to microbiological methods,rumen microbiology, microbiological methods for space missions and extreme environments, sampling methods and samplers, soil and sediment microbiology, transcriptomics, veterinary microbiology, sero-diagnostics and typing/identification.
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