将基因组大小与印度东北部半自然景观中的生命形式和群落结构联系起来。

IF 2.5 3区 生物学 Q3 CELL BIOLOGY
Alok Senapati, Debaditya Gupta, Bimal K Chetri, Nihal Gujre, Sudip Mitra, Latha Rangan
{"title":"将基因组大小与印度东北部半自然景观中的生命形式和群落结构联系起来。","authors":"Alok Senapati, Debaditya Gupta, Bimal K Chetri, Nihal Gujre, Sudip Mitra, Latha Rangan","doi":"10.1007/s00709-025-02119-0","DOIUrl":null,"url":null,"abstract":"<p><p>Northeast India, a global biodiversity hotspot, harbors exceptional plant diversity within the Indo-Burma region. This study provides the first comprehensive integration of floristic, ecological, and genomic analyses of angiosperm diversity in North Guwahati, Assam, using the Indian Institute of Technology Guwahati campus as a model semi-natural landscape. Systematic year-long surveys recorded 434 angiosperm species belonging to 312 genera and 101 families, including 70 trees, 86 shrubs, and 244 herbs (with 31 climbers and a few aquatics). Poaceae was the most species-rich family (34 species), followed by Fabaceae (29) and Cyperaceae (26), reflecting typical tropical diversity. Spatial analysis revealed strong habitat-specific species distribution, with open plains supporting the highest diversity (206 species) and forest edges harboring rare taxa. Community structure across four ecological zones showed significant spatial heterogeneity, with Zone 1 having the highest Shannon-Wiener diversity (H' = 4.084) and Zone 4 the highest evenness (E = 0.905). Nuclear DNA content (2C values) was estimated via flow cytometry for 110 species, contributing 58 novel genome size records and revealing a 98-fold variation (0.43-42.5 pg). Monocots had significantly larger genomes than dicots (4.79 vs. 1.63 pg, p < 0.001), and ecological trends showed a progressive increase in genome size from herbaceous (1.93 pg) to woody forms (2.50 pg), supporting the large genome constraint hypothesis. GIS mapping integrated taxonomic, ecological, and genomic data, uncovering spatial patterns in diversity and genome evolution. region. This comprehensive framework provides a crucial foundation for assessing biodiversity and guiding conservation efforts in this ecologically important region.</p>","PeriodicalId":20731,"journal":{"name":"Protoplasma","volume":" ","pages":""},"PeriodicalIF":2.5000,"publicationDate":"2025-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Linking genome size to life form and community structure in a semi-natural landscape from Northeast India.\",\"authors\":\"Alok Senapati, Debaditya Gupta, Bimal K Chetri, Nihal Gujre, Sudip Mitra, Latha Rangan\",\"doi\":\"10.1007/s00709-025-02119-0\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Northeast India, a global biodiversity hotspot, harbors exceptional plant diversity within the Indo-Burma region. This study provides the first comprehensive integration of floristic, ecological, and genomic analyses of angiosperm diversity in North Guwahati, Assam, using the Indian Institute of Technology Guwahati campus as a model semi-natural landscape. Systematic year-long surveys recorded 434 angiosperm species belonging to 312 genera and 101 families, including 70 trees, 86 shrubs, and 244 herbs (with 31 climbers and a few aquatics). Poaceae was the most species-rich family (34 species), followed by Fabaceae (29) and Cyperaceae (26), reflecting typical tropical diversity. Spatial analysis revealed strong habitat-specific species distribution, with open plains supporting the highest diversity (206 species) and forest edges harboring rare taxa. Community structure across four ecological zones showed significant spatial heterogeneity, with Zone 1 having the highest Shannon-Wiener diversity (H' = 4.084) and Zone 4 the highest evenness (E = 0.905). Nuclear DNA content (2C values) was estimated via flow cytometry for 110 species, contributing 58 novel genome size records and revealing a 98-fold variation (0.43-42.5 pg). Monocots had significantly larger genomes than dicots (4.79 vs. 1.63 pg, p < 0.001), and ecological trends showed a progressive increase in genome size from herbaceous (1.93 pg) to woody forms (2.50 pg), supporting the large genome constraint hypothesis. GIS mapping integrated taxonomic, ecological, and genomic data, uncovering spatial patterns in diversity and genome evolution. region. This comprehensive framework provides a crucial foundation for assessing biodiversity and guiding conservation efforts in this ecologically important region.</p>\",\"PeriodicalId\":20731,\"journal\":{\"name\":\"Protoplasma\",\"volume\":\" \",\"pages\":\"\"},\"PeriodicalIF\":2.5000,\"publicationDate\":\"2025-10-14\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Protoplasma\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1007/s00709-025-02119-0\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"CELL BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Protoplasma","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1007/s00709-025-02119-0","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CELL BIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

印度东北部是全球生物多样性热点地区,在印缅地区拥有独特的植物多样性。本研究首次以印度理工学院古瓦哈蒂校区为模型,对阿萨姆邦古瓦哈蒂北部被子植物的植物区系、生态和基因组多样性进行了综合分析。历时一年的系统调查记录了101科312属434种被子植物,包括70种乔木、86种灌木和244种草本植物(31种攀缘植物和少量水生植物)。禾科植物种类最多(34种),其次是豆科(29种)和苏柏科(26种),具有典型的热带多样性。空间分析结果显示,物种分布具有明显的生境特异性,开阔平原的物种多样性最高(206种),森林边缘的物种多样性较为罕见。4个生态区的群落结构具有显著的空间异质性,其中1区Shannon-Wiener多样性最高(H′= 4.084),4区均匀度最高(E = 0.905)。通过流式细胞术估计了110个物种的核DNA含量(2C值),提供了58个新的基因组大小记录,揭示了98倍的变异(0.43-42.5 pg)。单子房的基因组明显大于双子房(4.79比1.63 pg, p
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Linking genome size to life form and community structure in a semi-natural landscape from Northeast India.

Northeast India, a global biodiversity hotspot, harbors exceptional plant diversity within the Indo-Burma region. This study provides the first comprehensive integration of floristic, ecological, and genomic analyses of angiosperm diversity in North Guwahati, Assam, using the Indian Institute of Technology Guwahati campus as a model semi-natural landscape. Systematic year-long surveys recorded 434 angiosperm species belonging to 312 genera and 101 families, including 70 trees, 86 shrubs, and 244 herbs (with 31 climbers and a few aquatics). Poaceae was the most species-rich family (34 species), followed by Fabaceae (29) and Cyperaceae (26), reflecting typical tropical diversity. Spatial analysis revealed strong habitat-specific species distribution, with open plains supporting the highest diversity (206 species) and forest edges harboring rare taxa. Community structure across four ecological zones showed significant spatial heterogeneity, with Zone 1 having the highest Shannon-Wiener diversity (H' = 4.084) and Zone 4 the highest evenness (E = 0.905). Nuclear DNA content (2C values) was estimated via flow cytometry for 110 species, contributing 58 novel genome size records and revealing a 98-fold variation (0.43-42.5 pg). Monocots had significantly larger genomes than dicots (4.79 vs. 1.63 pg, p < 0.001), and ecological trends showed a progressive increase in genome size from herbaceous (1.93 pg) to woody forms (2.50 pg), supporting the large genome constraint hypothesis. GIS mapping integrated taxonomic, ecological, and genomic data, uncovering spatial patterns in diversity and genome evolution. region. This comprehensive framework provides a crucial foundation for assessing biodiversity and guiding conservation efforts in this ecologically important region.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Protoplasma
Protoplasma 生物-细胞生物学
CiteScore
6.60
自引率
6.90%
发文量
99
审稿时长
4-8 weeks
期刊介绍: Protoplasma publishes original papers, short communications and review articles which are of interest to cell biology in all its scientific and applied aspects. We seek contributions dealing with plants and animals but also prokaryotes, protists and fungi, from the following fields: cell biology of both single and multicellular organisms molecular cytology the cell cycle membrane biology including biogenesis, dynamics, energetics and electrophysiology inter- and intracellular transport the cytoskeleton organelles experimental and quantitative ultrastructure cyto- and histochemistry Further, conceptual contributions such as new models or discoveries at the cutting edge of cell biology research will be published under the headings "New Ideas in Cell Biology".
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信