Raafat M Munshi, Lammar R Munshi, Hanen Himdi, Amjad Qashlan, Reema Munshi, Othman Y Alyahyawy, Mashael M Khayyat
{"title":"用树结构Parzen估计器优化超参数以提高糖尿病预测。","authors":"Raafat M Munshi, Lammar R Munshi, Hanen Himdi, Amjad Qashlan, Reema Munshi, Othman Y Alyahyawy, Mashael M Khayyat","doi":"10.1038/s41598-025-19295-x","DOIUrl":null,"url":null,"abstract":"<p><p>Diabetes is a lifelong condition that occurs when the pancreas loses its ability to secrete insulin or experiences a significant reduction in insulin production. Early identification of high-risk patients is crucial for timely interventions and improved outcomes. Traditional clinical risk prediction models rely on regression analysis using clinical, sociodemographic, and anthropometric data; however, they have limitations in terms of accuracy and generalizability. This research proposes a diagnostic strategy leveraging machine learning (ML) techniques, specifically the XGBoost algorithm optimised with Optuna, to enhance high-risk prediction based on laboratory parameters. The study utilises an open-access diabetes dataset incorporating patient demographics, laboratory test results, and clinical outcomes. Data preprocessing, including cleaning, normalisation, and feature extraction, is performed using an Adaptive Tree-Structured Parzen Estimator (ATPE) and XGBoost model. The proposed model outperforms conventional classification models, achieving 83% accuracy, 80% precision, 78% recall, and a 78% F1 score. A comprehensive correlation and confusion matrix evaluation highlights the model's effectiveness in distinguishing high-risk patients. Findings indicate that integrating machine learning (ML)-based risk classification frameworks with laboratory test-based diagnostic strategies improves predictive accuracy and patient stratification. However, data quality, population diversity, and real-time applicability remain challenges. Future research should explore the integration of real-time data from wearable devices and expand model deployment to other chronic and rare diseases, enhancing adaptability and clinical decision-making.</p>","PeriodicalId":21811,"journal":{"name":"Scientific Reports","volume":"15 1","pages":"35430"},"PeriodicalIF":3.9000,"publicationDate":"2025-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Optimising hyperparameters with a tree structured Parzen estimator to improve diabetes prediction.\",\"authors\":\"Raafat M Munshi, Lammar R Munshi, Hanen Himdi, Amjad Qashlan, Reema Munshi, Othman Y Alyahyawy, Mashael M Khayyat\",\"doi\":\"10.1038/s41598-025-19295-x\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Diabetes is a lifelong condition that occurs when the pancreas loses its ability to secrete insulin or experiences a significant reduction in insulin production. Early identification of high-risk patients is crucial for timely interventions and improved outcomes. Traditional clinical risk prediction models rely on regression analysis using clinical, sociodemographic, and anthropometric data; however, they have limitations in terms of accuracy and generalizability. This research proposes a diagnostic strategy leveraging machine learning (ML) techniques, specifically the XGBoost algorithm optimised with Optuna, to enhance high-risk prediction based on laboratory parameters. The study utilises an open-access diabetes dataset incorporating patient demographics, laboratory test results, and clinical outcomes. Data preprocessing, including cleaning, normalisation, and feature extraction, is performed using an Adaptive Tree-Structured Parzen Estimator (ATPE) and XGBoost model. The proposed model outperforms conventional classification models, achieving 83% accuracy, 80% precision, 78% recall, and a 78% F1 score. A comprehensive correlation and confusion matrix evaluation highlights the model's effectiveness in distinguishing high-risk patients. Findings indicate that integrating machine learning (ML)-based risk classification frameworks with laboratory test-based diagnostic strategies improves predictive accuracy and patient stratification. However, data quality, population diversity, and real-time applicability remain challenges. Future research should explore the integration of real-time data from wearable devices and expand model deployment to other chronic and rare diseases, enhancing adaptability and clinical decision-making.</p>\",\"PeriodicalId\":21811,\"journal\":{\"name\":\"Scientific Reports\",\"volume\":\"15 1\",\"pages\":\"35430\"},\"PeriodicalIF\":3.9000,\"publicationDate\":\"2025-10-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Scientific Reports\",\"FirstCategoryId\":\"103\",\"ListUrlMain\":\"https://doi.org/10.1038/s41598-025-19295-x\",\"RegionNum\":2,\"RegionCategory\":\"综合性期刊\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"MULTIDISCIPLINARY SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Scientific Reports","FirstCategoryId":"103","ListUrlMain":"https://doi.org/10.1038/s41598-025-19295-x","RegionNum":2,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MULTIDISCIPLINARY SCIENCES","Score":null,"Total":0}
Optimising hyperparameters with a tree structured Parzen estimator to improve diabetes prediction.
Diabetes is a lifelong condition that occurs when the pancreas loses its ability to secrete insulin or experiences a significant reduction in insulin production. Early identification of high-risk patients is crucial for timely interventions and improved outcomes. Traditional clinical risk prediction models rely on regression analysis using clinical, sociodemographic, and anthropometric data; however, they have limitations in terms of accuracy and generalizability. This research proposes a diagnostic strategy leveraging machine learning (ML) techniques, specifically the XGBoost algorithm optimised with Optuna, to enhance high-risk prediction based on laboratory parameters. The study utilises an open-access diabetes dataset incorporating patient demographics, laboratory test results, and clinical outcomes. Data preprocessing, including cleaning, normalisation, and feature extraction, is performed using an Adaptive Tree-Structured Parzen Estimator (ATPE) and XGBoost model. The proposed model outperforms conventional classification models, achieving 83% accuracy, 80% precision, 78% recall, and a 78% F1 score. A comprehensive correlation and confusion matrix evaluation highlights the model's effectiveness in distinguishing high-risk patients. Findings indicate that integrating machine learning (ML)-based risk classification frameworks with laboratory test-based diagnostic strategies improves predictive accuracy and patient stratification. However, data quality, population diversity, and real-time applicability remain challenges. Future research should explore the integration of real-time data from wearable devices and expand model deployment to other chronic and rare diseases, enhancing adaptability and clinical decision-making.
期刊介绍:
We publish original research from all areas of the natural sciences, psychology, medicine and engineering. You can learn more about what we publish by browsing our specific scientific subject areas below or explore Scientific Reports by browsing all articles and collections.
Scientific Reports has a 2-year impact factor: 4.380 (2021), and is the 6th most-cited journal in the world, with more than 540,000 citations in 2020 (Clarivate Analytics, 2021).
•Engineering
Engineering covers all aspects of engineering, technology, and applied science. It plays a crucial role in the development of technologies to address some of the world''s biggest challenges, helping to save lives and improve the way we live.
•Physical sciences
Physical sciences are those academic disciplines that aim to uncover the underlying laws of nature — often written in the language of mathematics. It is a collective term for areas of study including astronomy, chemistry, materials science and physics.
•Earth and environmental sciences
Earth and environmental sciences cover all aspects of Earth and planetary science and broadly encompass solid Earth processes, surface and atmospheric dynamics, Earth system history, climate and climate change, marine and freshwater systems, and ecology. It also considers the interactions between humans and these systems.
•Biological sciences
Biological sciences encompass all the divisions of natural sciences examining various aspects of vital processes. The concept includes anatomy, physiology, cell biology, biochemistry and biophysics, and covers all organisms from microorganisms, animals to plants.
•Health sciences
The health sciences study health, disease and healthcare. This field of study aims to develop knowledge, interventions and technology for use in healthcare to improve the treatment of patients.