细胞骨架介导的反馈控制细胞极化的空间分布:一项计算研究。

IF 3.6 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Parijat Banerjee, Jonathan A Kuhn, Dhiman Sankar Pal, Yu Deng, Tatsat Banerjee, Peter N Devreotes, Pablo A Iglesias
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引用次数: 0

摘要

在群居变形虫Dictyostelium中,细胞运动是通过一个信号转导可兴奋网络来调节的,该网络与细胞骨架连接,控制肌动蛋白聚合模式。反过来,细胞骨架通过几个反馈回路影响信号机制,但这种反馈的性质和功能仍然知之甚少。在这项研究中,我们使用计算模型来辨别互补的正负反馈回路在极化细胞中的重要作用。我们对比了两种潜在的负反馈机制:局部抑制和全局抑制。我们的研究结果表明,这两种机制都可以稳定前沿并抑制肌动蛋白在其他位点的聚合,从而防止多极化。虽然一些实验扰动更符合局部抑制模型,但统计分析显示其极化电位在很宽的兴奋范围内是有限的。相反,全局抑制更有效地抑制了第二和第三前缘的形成,使其成为一种更强大的极化机制。这提出了一个有趣的问题:如果局部抑制能更好地复制实验观察结果,但对极化的影响不如局部激发和全局抑制,那么是否存在增强其极化电位的补充机制?为了解决这个问题,我们提出了一种涉及后分子动态分配的新机制,该机制增强了细胞前后之间的通信,并且可以通过细胞骨架和信号转导之间的局部反馈相互作用来提高极化效率。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Spatial distribution of cytoskeleton-mediated feedback controls cell polarization: A computational study.

In the social amoeba Dictyostelium, cell motility is regulated through a signal transduction excitable network that interfaces with the cytoskeleton to control actin polymerization patterns. In turn, the cytoskeleton influences the signaling machinery via several feedback loops, but the nature and function of this feedback remain poorly understood. In this study, we use computational models to discern the essential role of complementary positive and negative feedback loops in polarizing cells. We contrast two potential mechanisms for the negative feedback: local inhibition and global inhibition. Our results indicate that both mechanisms can stabilize the leading edge and inhibit actin polymerization in other sites, preventing multipolarity. While some experimental perturbations align more closely with the local inhibition model, statistical analyses reveal its limited polarization potential within a wide excitability range. Conversely, global inhibition more effectively suppresses secondary and tertiary leading-edge formation, making it a more robust polarization mechanism. This raises an intriguing question: if local inhibition better replicates experimental observations but is less effective for polarization than local excitation and global inhibition, could there be a supplementary mechanism enhancing its polarization potential? To address this, we propose a novel mechanism involving the dynamic partitioning of back molecules which enhances communication between the front and back of the cell and can be leveraged by local feedback interactions between the cytoskeleton and signal transduction to improve polarization efficiency.

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来源期刊
PLoS Computational Biology
PLoS Computational Biology BIOCHEMICAL RESEARCH METHODS-MATHEMATICAL & COMPUTATIONAL BIOLOGY
CiteScore
7.10
自引率
4.70%
发文量
820
审稿时长
2.5 months
期刊介绍: PLOS Computational Biology features works of exceptional significance that further our understanding of living systems at all scales—from molecules and cells, to patient populations and ecosystems—through the application of computational methods. Readers include life and computational scientists, who can take the important findings presented here to the next level of discovery. Research articles must be declared as belonging to a relevant section. More information about the sections can be found in the submission guidelines. Research articles should model aspects of biological systems, demonstrate both methodological and scientific novelty, and provide profound new biological insights. Generally, reliability and significance of biological discovery through computation should be validated and enriched by experimental studies. Inclusion of experimental validation is not required for publication, but should be referenced where possible. Inclusion of experimental validation of a modest biological discovery through computation does not render a manuscript suitable for PLOS Computational Biology. Research articles specifically designated as Methods papers should describe outstanding methods of exceptional importance that have been shown, or have the promise to provide new biological insights. The method must already be widely adopted, or have the promise of wide adoption by a broad community of users. Enhancements to existing published methods will only be considered if those enhancements bring exceptional new capabilities.
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