{"title":"揭示了一个广谱α-羟基酸和多羟基酸(糖酸)异构酶家族。","authors":"Julian Urdiain-Arraiza, Benoît Desguin","doi":"10.1016/j.ijbiomac.2025.148171","DOIUrl":null,"url":null,"abstract":"<p><p>α-Hydroxy acids (AHAs) and polyhydroxy acids (PHAs) are of key importance in organic synthesis and find numerous applications in various industries. However, the stereoselective synthesis of these compounds, whether enzymatic or chemical, remains a major challenge. In this study, we uncover a previously uncharacterized family of lactate racemase homologs (LarAHs) within the LarA superfamily and show their ability to catalyze the interconversion of AHA and PHA stereoisomers. Through systematic biochemical characterization, we investigated the substrate specificity, catalytic properties, and structural modelling of four representative LarAHs from this novel family. Our findings demonstrate that these enzymes act as broad-spectrum hydroxy acid isomerases (BSHIs) and exhibit racemase activity on up to 15 structurally diverse AHAs (including aliphatic, aromatic, and polycarboxylic AHAs), and C2-epimerase activity on up to 24 distinct PHAs (including aldonic acids, uronic acids, aldaric acids, and other sugar-derived acids). Notably, 20 of the sugar acid C2-epimerization reactions identified were previously unreported. Structural analysis revealed that BSHIs possess an original C-terminal fold that forms a substrate-binding site adapted for bulky substrates, with considerable active-site flexibility likely contributing to their broad substrate specificity. Collectively, these findings suggest the biotechnological potential of BSHIs for stereoselective interconversion of valuable AHA and PHA stereoisomers.</p>","PeriodicalId":333,"journal":{"name":"International Journal of Biological Macromolecules","volume":" ","pages":"148171"},"PeriodicalIF":8.5000,"publicationDate":"2025-10-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Shedding light on a family of broad-spectrum α-hydroxy acid and polyhydroxy acid (sugar acid) isomerases.\",\"authors\":\"Julian Urdiain-Arraiza, Benoît Desguin\",\"doi\":\"10.1016/j.ijbiomac.2025.148171\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>α-Hydroxy acids (AHAs) and polyhydroxy acids (PHAs) are of key importance in organic synthesis and find numerous applications in various industries. However, the stereoselective synthesis of these compounds, whether enzymatic or chemical, remains a major challenge. In this study, we uncover a previously uncharacterized family of lactate racemase homologs (LarAHs) within the LarA superfamily and show their ability to catalyze the interconversion of AHA and PHA stereoisomers. Through systematic biochemical characterization, we investigated the substrate specificity, catalytic properties, and structural modelling of four representative LarAHs from this novel family. Our findings demonstrate that these enzymes act as broad-spectrum hydroxy acid isomerases (BSHIs) and exhibit racemase activity on up to 15 structurally diverse AHAs (including aliphatic, aromatic, and polycarboxylic AHAs), and C2-epimerase activity on up to 24 distinct PHAs (including aldonic acids, uronic acids, aldaric acids, and other sugar-derived acids). Notably, 20 of the sugar acid C2-epimerization reactions identified were previously unreported. Structural analysis revealed that BSHIs possess an original C-terminal fold that forms a substrate-binding site adapted for bulky substrates, with considerable active-site flexibility likely contributing to their broad substrate specificity. Collectively, these findings suggest the biotechnological potential of BSHIs for stereoselective interconversion of valuable AHA and PHA stereoisomers.</p>\",\"PeriodicalId\":333,\"journal\":{\"name\":\"International Journal of Biological Macromolecules\",\"volume\":\" \",\"pages\":\"148171\"},\"PeriodicalIF\":8.5000,\"publicationDate\":\"2025-10-07\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Journal of Biological Macromolecules\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://doi.org/10.1016/j.ijbiomac.2025.148171\",\"RegionNum\":1,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Biological Macromolecules","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1016/j.ijbiomac.2025.148171","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
Shedding light on a family of broad-spectrum α-hydroxy acid and polyhydroxy acid (sugar acid) isomerases.
α-Hydroxy acids (AHAs) and polyhydroxy acids (PHAs) are of key importance in organic synthesis and find numerous applications in various industries. However, the stereoselective synthesis of these compounds, whether enzymatic or chemical, remains a major challenge. In this study, we uncover a previously uncharacterized family of lactate racemase homologs (LarAHs) within the LarA superfamily and show their ability to catalyze the interconversion of AHA and PHA stereoisomers. Through systematic biochemical characterization, we investigated the substrate specificity, catalytic properties, and structural modelling of four representative LarAHs from this novel family. Our findings demonstrate that these enzymes act as broad-spectrum hydroxy acid isomerases (BSHIs) and exhibit racemase activity on up to 15 structurally diverse AHAs (including aliphatic, aromatic, and polycarboxylic AHAs), and C2-epimerase activity on up to 24 distinct PHAs (including aldonic acids, uronic acids, aldaric acids, and other sugar-derived acids). Notably, 20 of the sugar acid C2-epimerization reactions identified were previously unreported. Structural analysis revealed that BSHIs possess an original C-terminal fold that forms a substrate-binding site adapted for bulky substrates, with considerable active-site flexibility likely contributing to their broad substrate specificity. Collectively, these findings suggest the biotechnological potential of BSHIs for stereoselective interconversion of valuable AHA and PHA stereoisomers.
期刊介绍:
The International Journal of Biological Macromolecules is a well-established international journal dedicated to research on the chemical and biological aspects of natural macromolecules. Focusing on proteins, macromolecular carbohydrates, glycoproteins, proteoglycans, lignins, biological poly-acids, and nucleic acids, the journal presents the latest findings in molecular structure, properties, biological activities, interactions, modifications, and functional properties. Papers must offer new and novel insights, encompassing related model systems, structural conformational studies, theoretical developments, and analytical techniques. Each paper is required to primarily focus on at least one named biological macromolecule, reflected in the title, abstract, and text.