通过高通量测序和药物基因组学分析的综合景观,靶向胶质母细胞瘤中的ORMDL2。

IF 3.2 3区 医学 Q1 MEDICINE, GENERAL & INTERNAL
International Journal of Medical Sciences Pub Date : 2025-09-27 eCollection Date: 2025-01-01 DOI:10.7150/ijms.116954
Fitria Sari Wulandari, Chih-Yang Wang, Sachin Kumar, Ngoc Phung Ly, Juan Lorell Ngadio, Dahlak Daniel Solomon, Do Thi Minh Xuan, Gabriela Natasha Sutandi, Hung-Yun Lin, Hui-Ru Lin, Yung-Kuo Lee, Hao-Chien Yang, Ming-Cheng Tsai, Ching-Chung Ko
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引用次数: 0

摘要

多形性胶质母细胞瘤(GBM)的特点是进展迅速,治疗耐药,肿瘤微环境具有严重的免疫抑制作用。越来越多的证据表明,内质网(ER)相关的大分子在肿瘤适应中起着关键作用。在本研究中,我们对orosomucoid-样蛋白2 (ORMDL2)进行了多组学研究,揭示了其在GBM进展中的调节功能。ORMDL2是一种保守的内质网膜蛋白,参与鞘脂生物合成和内质网应激调节。肿瘤基因组图谱(TCGA)和中国胶质瘤基因组图谱(CGGA)的转录组学分析显示,ORMDL2在GBM组织中表达升高,导致预后不良。MetaCore通路和基因集富集分析(GSEA)发现ORMDL2通过主要组织相容性复合体I (MHC类I)、未折叠蛋白反应(UPR)和线粒体凋亡信号传导参与抗原呈递。单细胞rna测序数据和人类蛋白图谱显示ORMDL2在肿瘤基质细胞中富集。通过癌症药物敏感性基因组学(GDSC)和癌症治疗反应门户(CTRP)数据库进行的药物基因组学相关性研究表明,ORMDL2的表达与对依托泊苷、阿霉素、talazoparib等DNA损伤反应抑制剂的耐药性有关,并可能与鞘脂靶向化合物相互作用。总之,我们的研究结果确定ORMDL2是GBM免疫抑制和治疗耐药的多功能大分子调节剂,为转化药物提供了新的机制见解和潜在靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Targeting ORMDL2 in glioblastoma through integrated landscape of high-throughput sequencing and pharmacogenomic analysis.

Glioblastoma multiforme (GBM) is characterized by rapid progression, therapeutic resistance, and a profoundly immunosuppressive tumor microenvironment. Emerging evidence suggests that endoplasmic reticulum (ER)-associated macromolecules play critical roles in tumor adaptation. In this study, we performed a multi-omics investigation of orosomucoid-like protein 2 (ORMDL2), a conserved ER membrane protein involved in sphingolipid biosynthesis and ER stress regulation, and uncovered its regulatory functions in GBM progression. Transcriptomic analyses across The Cancer Genome Atlas (TCGA), and Chinese Glioma Genome Atlas (CGGA) revealed elevated ORMDL2 expression in GBM tissues which causes poor prognosis. The MetaCore pathway and Gene Set Enrichment Analysis (GSEA) identified ORMDL2's involvement in antigen presentation via a major histocompatibility complex I (MHC class I), unfolded protein response (UPR), and mitochondrial apoptotic signaling. Single-cell RNA-sequencing data and the Human Protein Atlas showed ORMDL2 enrichment in tumor stromal cells. Pharmacogenomic correlation via the Genomics in Drug Sensitivity in Cancer (GDSC) and Cancer Therapeutics Response Portal (CTRP) database suggested that ORMDL2 expression was associated with resistance to DNA damage response inhibitors such as etoposide, doxorubicin, talazoparib, and might interact with sphingolipid-targeting compounds. Collectively, our findings establish ORMDL2 as a multi-functional macromolecular regulator of immune suppression and therapeutic resistance in GBM, providing new mechanistic insights and potential targets for translational medicines.

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来源期刊
International Journal of Medical Sciences
International Journal of Medical Sciences MEDICINE, GENERAL & INTERNAL-
CiteScore
7.20
自引率
0.00%
发文量
185
审稿时长
2.7 months
期刊介绍: Original research papers, reviews, and short research communications in any medical related area can be submitted to the Journal on the understanding that the work has not been published previously in whole or part and is not under consideration for publication elsewhere. Manuscripts in basic science and clinical medicine are both considered. There is no restriction on the length of research papers and reviews, although authors are encouraged to be concise. Short research communication is limited to be under 2500 words.
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