温度调节潮间带湿地可培养木质纤维素降解菌群的生物多样性和代谢。

Jiyu Chen,Min Yang,Qichao Tu,Lu Lin
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引用次数: 0

摘要

海岸带细菌在陆地有机碳转化中起着重要作用。然而,它们的生态模式和驱动因素仍然难以捉摸。在18.27°N至39.82°N之间,来自中国海岸线10个地区的180个细菌群落,分别在硬木(白杨)、软木(松木)和草本(稻草)三种典型的木质纤维素基质下进行培养。所有的菌群都显示出对TerrOC的广泛利用,并且显示出与先前通过原位木质纤维素富集建立的菌群相当的降解能力。此外,根据生态学的代谢理论,即使所有地点都在30°C下培养,年平均温度也会促进群落代谢。白杨富集菌群对温度的敏感性最高。16S rRNA基因扩增子和亚转录组测序分析揭示了温度依赖的纬度多样性梯度,这一趋势与陆生木质素降解微生物的温度-多样性正相关相反。群落组成发生了变化,以适应不断上升的环境温度。为了促进木质素的降解,来自高平均温度的白杨群落利用代谢通才,诱导以dypB为中心的木质素解聚基因家族的表达和木质素衍生物降解的多种途径。本研究从生态学角度揭示了沿海培养木质纤维素降解细菌群落的内在驱动因素,加深了我们对沿海TerrOC转化代谢机制的理解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Temperature mediates biodiversity and metabolism of culturable lignocellulose-degrading consortia from intertidal wetlands.
Coastal bacteria play an important role in the conversion of terrestrial organic carbon (TerrOC). However, their ecological patterns and drivers remains elusive. Here, 180 bacterial communities from 10 regions along the Chinese coastline, covering an 18,000 km transect between 18.27 °N and 39.82 °N, were cultured under three typical lignocellulosic substrates, hardwood (aspen), softwood (pine), and herbaceous (rice straw), respectively. All the consortia showed a broad spectrum of TerrOC utilization, and displayed degradation capacities comparable with those previously established though preliminary in situ lignocellulose enrichment. Moreover, following the metabolic theory of ecology, annual average temperature of the sites stimulated community metabolism, even though all were cultured at 30°C. Consortia enriched on aspen exhibited the highest temperature sensitivity. 16S rRNA gene amplicon and metatranscriptomic sequencing analyses revealed temperature-dependent latitudinal diversity gradients, displaying a trend that was opposite of the temperature-diversity positive relationship observed in terrestrial lignin-degrading microbes. The community composition shifted to adapt to rising environmental temperature. To enhance lignin degradation, aspen consortia from high annual average temperature employed metabolic generalists, which induced expression of dypB centered gene families for lignin depolymerization and versatile pathways for degradation of lignin derivates. This study reveals the intrinsic drivers for coastal cultured lignocellulose degrading bacterial communities from an ecological perspective and deepens our understanding of the metabolic mechanisms in coastal TerrOC conversion.
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