酶促x射线吸收光谱电化学。

IF 16 1区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Rafael N P Colombo, Graziela C Sedenho, Itamar T Neckel, Frank N Crespilho
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引用次数: 0

摘要

了解蛋白质的氧化还原特性和催化行为对于利用其在生物催化中的功能和促进高效的仿生催化剂设计至关重要。酶的x射线吸收光谱电化学(XA-SEC)结合了x射线吸收光谱的见解和电化学方法的精度来阐明酶的氧化还原性质和催化行为。在这里,我们描述了如何进行酶XA-SEC实验。该程序从碳基工作电极的制备开始,以增强酶的固定化。我们利用纳米材料在酶-电极界面增强生物材料的负载和电子转移,将来自疣状分枝杆菌的胆红素氧化酶有效地固定在电极表面。接下来,我们指导研究人员建立一个标准的三电极电化学电池,确保适当的电气连接和电解质制备。我们的方案详细介绍了同步加速器光源下的Cu k边x射线吸收光谱测量程序,并进行了原位电化学控制。实时氧化还原过程监测通过直接电子转移分析,提供有价值的热力学和动力学信息。测定被分析蛋白在x射线照射下的稳定性和活性是很重要的;我们的方法通常在长时间的实验运行中产生稳定的电化学和光谱信号,展示了酶的强大性能和有效的蛋白质固定。该方法将XA-SEC数据与直接电子转移和底物结合分析相关联的能力为推进我们对酶电催化的理解提供了强大的工具,并为开发可持续的生物电化学技术开辟了新的途径。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Enzymatic X-ray absorption spectroelectrochemistry.

Understanding the redox properties and catalytic behavior of proteins is critical for harnessing their functions in biocatalysis and to promote efficient bio-inspired catalysts design. Enzymatic X-ray absorption spectroelectrochemistry (XA-SEC) combines the insights of X-ray absorption spectroscopy with the precision of electrochemical methods to elucidate enzymes' redox properties and catalytic behavior. Here we describe how to perform enzymatic XA-SEC experiments. The procedure begins with the preparation of the carbon-based working electrode to enhance enzyme immobilization. We exemplify with the efficient immobilization of bilirubin oxidase from Myrothecium verrucaria on the electrode surface, utilizing nanomaterials to enhance biomaterial loading and electron-transfer at the enzyme-electrode interface. Next, we guide researchers through setting up a standard three-electrode electrochemical cell, ensuring proper electrical connections and electrolyte preparation. Our Protocol details the Cu K-edge X-ray absorption spectroscopy measurement procedure at the synchrotron light sources, with in situ electrochemical control. Real-time redox processes are monitored through direct electron transfer analysis, providing valuable thermodynamic and kinetic information. It is important to determine the stability and activity of the analyzed protein under X-ray beam exposure; our approach typically results in stable electrochemical and spectroscopic signals for long experimental runs, showcasing the enzyme's robust performance and efficient protein immobilization. The method's ability to correlate XA-SEC data with direct electron transfer and substrate-biding analysis provides a powerful tool for advancing our understanding of enzymatic electrocatalysis and opens new avenues for developing sustainable bioelectrochemical technologies.

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来源期刊
Nature Protocols
Nature Protocols 生物-生化研究方法
CiteScore
29.10
自引率
0.70%
发文量
128
审稿时长
4 months
期刊介绍: Nature Protocols focuses on publishing protocols used to address significant biological and biomedical science research questions, including methods grounded in physics and chemistry with practical applications to biological problems. The journal caters to a primary audience of research scientists and, as such, exclusively publishes protocols with research applications. Protocols primarily aimed at influencing patient management and treatment decisions are not featured. The specific techniques covered encompass a wide range, including but not limited to: Biochemistry, Cell biology, Cell culture, Chemical modification, Computational biology, Developmental biology, Epigenomics, Genetic analysis, Genetic modification, Genomics, Imaging, Immunology, Isolation, purification, and separation, Lipidomics, Metabolomics, Microbiology, Model organisms, Nanotechnology, Neuroscience, Nucleic-acid-based molecular biology, Pharmacology, Plant biology, Protein analysis, Proteomics, Spectroscopy, Structural biology, Synthetic chemistry, Tissue culture, Toxicology, and Virology.
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