Anna:一个将机器学习分类器与兽医电子健康记录实时集成的开源平台。

IF 2.6 2区 农林科学 Q1 VETERINARY SCIENCES
Chun Yin Kong, Picasso Vasquez, Makan Farhoodimoghadam, Chris Brandt, Titus C Brown, Krystle L Reagan, Allison Zwingenberger, Stefan M Keller
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引用次数: 0

摘要

背景:在快速发展的兽医保健领域,将机器学习(ML)临床决策工具与电子健康记录(EHRs)相结合有望提高诊断准确性和患者护理。然而,将ML分类器无缝集成到兽医学现有的EHR系统中,往往受到这些系统固有的刚性或IT资源的有限可用性的阻碍,无法实现ML兼容性所需的修改。结果:Anna是一个独立的分析平台,可以托管ML分类器,并与EHR系统接口,实时为实验室数据提供分类器预测。根据EHR系统的请求,Anna从EHR系统中检索患者特定的数据,根据用户定义的时间标准合并诊断测试结果,并返回所有可用分类器的预测结果,以便实时显示。Anna是用Python开发的,并且是免费的。由于Anna是一个独立的平台,它不需要对现有的EHR进行实质性的修改,从而可以轻松地集成到现有的计算基础设施中。为了证明Anna的多功能性,我们实现了三个先前发表的ML分类器来预测狗的肾上腺皮质功能减退症、钩端螺旋体病或门静脉系统分流的诊断。结论:Anna是一个开源工具,旨在提高兽医社区ML分类器的可访问性。其灵活的体系结构支持用各种编程语言开发的分类器的集成,并具有不同的环境要求。Anna促进快速原型设计,使研究人员和开发人员能够快速部署ML分类器,而无需修改现有的EHR系统。安娜可以推动机器学习在兽医实践中的广泛应用,最终提高诊断能力和患者的治疗效果。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Anna: an open-source platform for real-time integration of machine learning classifiers with veterinary electronic health records.

Background: In the rapidly evolving landscape of veterinary healthcare, integrating machine learning (ML) clinical decision-making tools with electronic health records (EHRs) promises to improve diagnostic accuracy and patient care. However, the seamless integration of ML classifiers into existing EHR systems in veterinary medicine is often hindered by the inherent rigidity of these systems or by the limited availability of IT resources to implement the modifications necessary for ML compatibility.

Results: Anna is a standalone analytics platform that can host ML classifiers and interfaces with EHR systems to provide classifier predictions for laboratory data in real-time. Following a request from the EHR system, Anna retrieves patient-specific data from the EHR system, merges diagnostic test results based on user-defined temporal criteria and returns predictions for all available classifiers for display in real-time. Anna was developed in Python and is freely available. Because Anna is a stand-alone platform, it does not require substantial modifications to the existing EHR, allowing for easy integration into existing computing infrastructure. To demonstrate Anna's versatility, we implemented three previously published ML classifiers to predict a diagnosis of hypoadrenocorticism, leptospirosis, or a portosystemic shunt in dogs.

Conclusion: Anna is an open-source tool designed to improve the accessibility of ML classifiers for the veterinary community. Its flexible architecture supports the integration of classifiers developed in various programming languages and with diverse environment requirements. Anna facilitates rapid prototyping, enabling researchers and developers to deploy ML classifiers quickly without modifications to the existing EHR system. Anna could drive broader adoption of ML in veterinary practices, ultimately enhancing diagnostic capabilities and patient outcomes.

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来源期刊
BMC Veterinary Research
BMC Veterinary Research VETERINARY SCIENCES-
CiteScore
4.80
自引率
3.80%
发文量
420
审稿时长
3-6 weeks
期刊介绍: BMC Veterinary Research is an open access, peer-reviewed journal that considers articles on all aspects of veterinary science and medicine, including the epidemiology, diagnosis, prevention and treatment of medical conditions of domestic, companion, farm and wild animals, as well as the biomedical processes that underlie their health.
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